Gene Anae109_4168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_4168 
Symbol 
ID5376689 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4887725 
End bp4888978 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content79% 
IMG OID640845695 
Productribosomal small subunit Rsm22 
Protein accessionYP_001381330 
Protein GI153007005 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG5459] Predicted rRNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.202008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.1784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGCGCG CTCCCGCCGA AGACCTCGCC CGCTGGGTCC CGCACCTCGT CCGCGTCTGG 
CGCGAGAGCC GCGGCGGGTC GAGAGGACCT CGCGGCGCGA TCCGCGGCGG CAGGCACGGC
CAGCGCCCCC AGCCGCGCGC CGCGCCCCGA GGCGCAGCCG CCGACGGGGG CCTGCTCGCG
CCCGACGAGC TGCGCGAGGT GGGCGCCGCG GTCGCTCGCC TGTCGAGGGG GCTCACGCGC
GAGCGCGAGC TCGCCGGGGC GCGCTACCTG GACGAGGAGC GGCTGCTCGG CGCGTACCTG
CTCTTCTACT GGCCCATCTC GTACCTCCAG GCGCGGGGGA TCCTCTCCGA GCTGCCGCGC
CGCCCGCGCA CCGCGCTCGA CCTCGGCAGC GGCCCCGCGC CGGTCGCGTT CGCGGCCCTG
GACGCCGGCG CCGCCGAGGT GGTCGCCGCG GATCGCTCCG CCCGGGCGCT CGCCTCGGCG
CGGGCGCTGG CGGCGGCTGC GGGCGAGCCG ATCGCCACGC GCGAGTGGAA CCCCACCCGC
GGGCGGCCGC TCGCGGAGCT CGCCGGGGGA CGCCGCTTCG ACGTGGTCAC GATGGGCCAC
GTCGTGAACG AGCTCTTCCC CGGGCCCGAC GCCGACGCGC GCAGGGCCGA TCTGCTCGAG
GGGGCGCTGG ACCTCGTCGG GCCGGGCGGC TCGCTCGTGG TCATCGAGCC GGCGCTGCGC
GACACCTCCC GCGCGCTGCT CCGCGTGCGC GACCTGCTCG TCGCGCGCGG CCACGCGGTG
CGCGCGCCCT GCCTGTTCCG TGGCCCTTGC CCCGCGCTGC TGCGCGAGAC CGACTGGTGC
CACGCCGAGC GCCCCATCGA GCCACCGCCC ATCGTCGCGC AGCTGGGCAA GGCCGCCGGC
CTCCGCAAGG AGGCGGCGAA GATGAGCTAC CTCGTCCTCG CGCCGAAGGG CGAGGGCTGG
GTCGAGCCGC CTCCCGGGCG CGTGTTCCGC GTGGTGTCGG AGCCGCTCGC GTCGAAGGGG
CGGCTCCGCT ACATGGGGTG CGGGCCCGAG GGGAGGGTGG GGCTCTCCCT GCAGGAGAAG
CACGTCGGCG ACGGGAACCG CCGCTTCGGA GCGCTCCTCC GCGGCGACGT GGTCGAGATC
GCGGGCGCCG AGCCGCGCGG CGACGGGCTC GCGCTCGGCG AGGGGTCGTC GGTGAGGGTC
CTCGCCCCCG CAGGGCGGCC GGTCCCGCCG GGCGAGCGGC CGGCGGGGGG ATGA
 
Protein sequence
MPRAPAEDLA RWVPHLVRVW RESRGGSRGP RGAIRGGRHG QRPQPRAAPR GAAADGGLLA 
PDELREVGAA VARLSRGLTR ERELAGARYL DEERLLGAYL LFYWPISYLQ ARGILSELPR
RPRTALDLGS GPAPVAFAAL DAGAAEVVAA DRSARALASA RALAAAAGEP IATREWNPTR
GRPLAELAGG RRFDVVTMGH VVNELFPGPD ADARRADLLE GALDLVGPGG SLVVIEPALR
DTSRALLRVR DLLVARGHAV RAPCLFRGPC PALLRETDWC HAERPIEPPP IVAQLGKAAG
LRKEAAKMSY LVLAPKGEGW VEPPPGRVFR VVSEPLASKG RLRYMGCGPE GRVGLSLQEK
HVGDGNRRFG ALLRGDVVEI AGAEPRGDGL ALGEGSSVRV LAPAGRPVPP GERPAGG