Gene Anae109_4157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_4157 
Symbol 
ID5376314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4872444 
End bp4873880 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content75% 
IMG OID640845684 
Productselenocysteine synthase 
Protein accessionYP_001381319 
Protein GI153006994 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] 
TIGRFAM ID[TIGR00474] seryl-tRNA(sec) selenium transferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.109282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTC CAAATTCCGG GACGAGCCCC CCGTCCGAGG CTCGGAAATT GCCTCGCGCC 
GACAGGCTGC TGGAAGCGGC CGACAGGGCG GGCCTCGTAC GCAGGCTCGG CCACGGCGCG
GTGATGGAGG CGGTGCGCGC TGCCCTGGAG CGGCTCCGGG CGGAGATCCT GGCCGGCGCG
GCCTGTCCAG CGCCCGAGGC CATCGAGCGT GACCTCCTCG AGCGGCTGGA GTCCGCCGCG
CGCGGCTCCC TCCGGCCGGT GATCAACGCC ACCGGCGTGG TCGTCCACAC CAACCTCGGC
CGCGCGCCGC TCTCGGAGGA GACGATCGAC GCGATGCGGC GTGCCGCCGC GGGCTACACG
AACCTCGAGT ACGACCTCGA GGCCGGGGAG CGCGGCGATC GCTACGGCCA CGCCGAGGCC
CCCCTGTGCC GGCTCACCGG AGCCGAGGCC GCCGTGGTGG TGAACAACAA CGCCTCGGCG
GTGATGCTCG CCCTCGCCGC GCTCATGCCT GCGCGCCCAA CGGGCGACTC GCCGGCGGAG
GGGGCGCCCG AGGTGGTCGT CTCCCGTGGC CAGCTCGTCG AGATCGGCGG CGGGTTCCGC
ATCCCGGACG TCCTGCGTCG CTCCGGCGCA ACGCTCGTCG AGGTGGGCAC GACGAACCGC
ACCTACCGGC GCGACTACGA GGACGCGATC GGCCCCCGCA CGCGCATCCT CATGTCGGTG
CACCGCTCGA ACTTCCGGGT ACAGGGGTTC GTGCACGACC CGTCGCTGGA GGACCTCGTG
TCGCTCGGGC GCGAGCGCGA TCTGTGGGTG GTGGACGACC TCGGCTCGGG CACGCTGCTC
GCCACGGCGC CCCACGGCCT GGGCGTCGAG CCGACCGTGC AGGAGCGGGT CCGCGCCGGC
GCGGACCTCG TCTGCTTCTC CGGCGACAAG CTGCTCGGCG GTCCGCAGGC GGGGATCCTC
GTCGGCCGGC GCGAGGCGAT CCGGCGCGTG AAGCGCCACC CGCTCATGCG CGCGCTCCGC
GTGGACAAGG TCACCCTGGC CGGCCTCTCC GCGACGCTCG CCCACTACGA GCGCGGCGAG
GCGCTCGAGG CGATCCCGGT CTGGCGCGCC ATCTCGGCGC CGGCGCAGGC GCTGCGGGAG
CGCGCCGAGC GCTGGCGGGC GGCCCTCGGC GACGCGGGCG CGGCGTGCGC GGTGCTCCCC
GGTCAGTCGG CGGTGGGCGG CGGCTCGCTG CCGGAGGTGA CGATCCCGAC CTCGGTGCTC
GCCCTCCCCC CCGGCGATCC CCACGCGCTG CTCGCGCGGC TGCGGCGCTG CGATCCGCCC
GTGATCGCGC GCATCGAGGA GGACCGGGTC GTGCTCGATC CGCGCACGGT GCTGCCGGGG
GAGGACGAGC CGCTGGTGCG GTGTCTCGTG GAGGCGCTCG GGCGCTCGGG GCGGTAG
 
Protein sequence
MSTPNSGTSP PSEARKLPRA DRLLEAADRA GLVRRLGHGA VMEAVRAALE RLRAEILAGA 
ACPAPEAIER DLLERLESAA RGSLRPVINA TGVVVHTNLG RAPLSEETID AMRRAAAGYT
NLEYDLEAGE RGDRYGHAEA PLCRLTGAEA AVVVNNNASA VMLALAALMP ARPTGDSPAE
GAPEVVVSRG QLVEIGGGFR IPDVLRRSGA TLVEVGTTNR TYRRDYEDAI GPRTRILMSV
HRSNFRVQGF VHDPSLEDLV SLGRERDLWV VDDLGSGTLL ATAPHGLGVE PTVQERVRAG
ADLVCFSGDK LLGGPQAGIL VGRREAIRRV KRHPLMRALR VDKVTLAGLS ATLAHYERGE
ALEAIPVWRA ISAPAQALRE RAERWRAALG DAGAACAVLP GQSAVGGGSL PEVTIPTSVL
ALPPGDPHAL LARLRRCDPP VIARIEEDRV VLDPRTVLPG EDEPLVRCLV EALGRSGR