Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_4142 |
Symbol | |
ID | 5376776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 4848804 |
End bp | 4850297 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640845669 |
Product | outer membrane efflux protein |
Protein accession | YP_001381304 |
Protein GI | 153006979 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.958426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.00365026 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAACGCAG TGACCGCAGT GACCATGCTC GTGCTCGCGG CGGCGCAGGC GCAGGAGCCT GCCCCGAGCG CCGCGCCCGC GCCGCAGCCC GAGCAGGCGG CCCCGCCGGC GGCGCAGGAG GGCGGACCCC AGCGGCCCAG CCTCGACGCG CAGCCCGCGC CGCAGCCCGC GCCCGCCGGA GAGATCATCA CGCTCCAGCA GGCGCTCGGG ATCGCCGCCT CGCGCAACCT CGACCTGAAG GCGCTCGACG CGCGGCTCCG CCAGGCGGAC GAGGCGTCGG CGCAGGCGTG GGCCGGGTTC CTGCCGCAGC TCACGGCGAG CGGCCGGTAC ACGCGGAACG AGCGCGAGAG CTCGATCCCG GAGGGCGCCT TCGATCCGGG AGTCCCCGGC GTGCGGCCGC CCAGCCCGAA GATCACCATC GTCCCCAAGG ACCAGCTCAC CGGCCAGCTG GAGGCGACCC AGGTCCTGTT CTCGCCCGCC CTGTGGTTCG GCATCCGCGC CGCGCACAAG GGCGAGGCCG TGGCGAGGCA CAGCATCGAG AACGCCCGCC GCGATCTGCT CTTCGGCGTG GCGCAGGCGT ACTACGGCGT GGCGGCGCTG AAGCAGTCGG TGGAGGTCAC CGAGCGGCTC CTCGAGATCG CGCGCCGGCA GGAGAGCGAC GCCCGCGTGC GCTACCAGGC GGGCACCATC GCCAAGGTCG GCTACCTGCG CGCGGAGATC GACCGCGCGC GCGCCGAGCA GGATCTCCGC CGCTCGCGCA ACTCCTACGA GTCCGCCCGC ATCGCGCTCG CCACGCTCCT CGATCGTCCG GTCGACTTCG AGGTGACGGA CCCGCCCGAG CCGGACCTGC CGCCGGACCT CGCGCAGCTC GAGGAGGCCG CCCTGCGCCA CCGGAACGAC GTCCAGGCGG CGCGCCGCAA CGTCGAGCTG CAGCGCGCGA GCCGCAACGC CAGCTGGGGG CGCTACTTCC CGGACGTCGC CGCGTTCGGG CTGTATCAGG GTCAAAACGC CGCCGGGTTC AGCGGCCAGG AGACGGCGTG GGCCGCCGGC GTCGGGCTCT CCTGGACCCT CCTCGACGGC GGGCTGCGCG AGTCCCAGCT CCGCGAGGGC AACGCCAAGG TCGCCGAGGC GGAGGCCAGC GCGGCGAGCA CGGAGGCGCT CGCGCGAAGG GAGGTGCGCC AGGCGATCCT CGACCTCGAG AGCGCGCGCG CCAACGCCGC GAAGGCCAGG GAGCAGCGCG ACCTGGCCGC CGAGAACCAG CGCCTCGTCG ACGTCTCCTA CCGCGCGGGG GCCGCCACCG CGGTGGAGCA GGCGGACGCC ACCGCCGAGC TCCGCAACTC CGAGATCGCC GTCACGACCG AGTCGCTGTC CGCGCAGCTC GCGGCGGTGA GGCTCCTCCA GGTGGCGGGC GAGTTCGATC CGTTCCGCCG GCTGGAGGCG GTGCGGCAGC CGGCGCAGTC GCCGGAGGCA GCCGTGCCCG CGCCGCAGCG CTGA
|
Protein sequence | MNAVTAVTML VLAAAQAQEP APSAAPAPQP EQAAPPAAQE GGPQRPSLDA QPAPQPAPAG EIITLQQALG IAASRNLDLK ALDARLRQAD EASAQAWAGF LPQLTASGRY TRNERESSIP EGAFDPGVPG VRPPSPKITI VPKDQLTGQL EATQVLFSPA LWFGIRAAHK GEAVARHSIE NARRDLLFGV AQAYYGVAAL KQSVEVTERL LEIARRQESD ARVRYQAGTI AKVGYLRAEI DRARAEQDLR RSRNSYESAR IALATLLDRP VDFEVTDPPE PDLPPDLAQL EEAALRHRND VQAARRNVEL QRASRNASWG RYFPDVAAFG LYQGQNAAGF SGQETAWAAG VGLSWTLLDG GLRESQLREG NAKVAEAEAS AASTEALARR EVRQAILDLE SARANAAKAR EQRDLAAENQ RLVDVSYRAG AATAVEQADA TAELRNSEIA VTTESLSAQL AAVRLLQVAG EFDPFRRLEA VRQPAQSPEA AVPAPQR
|
| |