Gene Anae109_4142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_4142 
Symbol 
ID5376776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4848804 
End bp4850297 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content75% 
IMG OID640845669 
Productouter membrane efflux protein 
Protein accessionYP_001381304 
Protein GI153006979 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.958426 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00365026 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGCAG TGACCGCAGT GACCATGCTC GTGCTCGCGG CGGCGCAGGC GCAGGAGCCT 
GCCCCGAGCG CCGCGCCCGC GCCGCAGCCC GAGCAGGCGG CCCCGCCGGC GGCGCAGGAG
GGCGGACCCC AGCGGCCCAG CCTCGACGCG CAGCCCGCGC CGCAGCCCGC GCCCGCCGGA
GAGATCATCA CGCTCCAGCA GGCGCTCGGG ATCGCCGCCT CGCGCAACCT CGACCTGAAG
GCGCTCGACG CGCGGCTCCG CCAGGCGGAC GAGGCGTCGG CGCAGGCGTG GGCCGGGTTC
CTGCCGCAGC TCACGGCGAG CGGCCGGTAC ACGCGGAACG AGCGCGAGAG CTCGATCCCG
GAGGGCGCCT TCGATCCGGG AGTCCCCGGC GTGCGGCCGC CCAGCCCGAA GATCACCATC
GTCCCCAAGG ACCAGCTCAC CGGCCAGCTG GAGGCGACCC AGGTCCTGTT CTCGCCCGCC
CTGTGGTTCG GCATCCGCGC CGCGCACAAG GGCGAGGCCG TGGCGAGGCA CAGCATCGAG
AACGCCCGCC GCGATCTGCT CTTCGGCGTG GCGCAGGCGT ACTACGGCGT GGCGGCGCTG
AAGCAGTCGG TGGAGGTCAC CGAGCGGCTC CTCGAGATCG CGCGCCGGCA GGAGAGCGAC
GCCCGCGTGC GCTACCAGGC GGGCACCATC GCCAAGGTCG GCTACCTGCG CGCGGAGATC
GACCGCGCGC GCGCCGAGCA GGATCTCCGC CGCTCGCGCA ACTCCTACGA GTCCGCCCGC
ATCGCGCTCG CCACGCTCCT CGATCGTCCG GTCGACTTCG AGGTGACGGA CCCGCCCGAG
CCGGACCTGC CGCCGGACCT CGCGCAGCTC GAGGAGGCCG CCCTGCGCCA CCGGAACGAC
GTCCAGGCGG CGCGCCGCAA CGTCGAGCTG CAGCGCGCGA GCCGCAACGC CAGCTGGGGG
CGCTACTTCC CGGACGTCGC CGCGTTCGGG CTGTATCAGG GTCAAAACGC CGCCGGGTTC
AGCGGCCAGG AGACGGCGTG GGCCGCCGGC GTCGGGCTCT CCTGGACCCT CCTCGACGGC
GGGCTGCGCG AGTCCCAGCT CCGCGAGGGC AACGCCAAGG TCGCCGAGGC GGAGGCCAGC
GCGGCGAGCA CGGAGGCGCT CGCGCGAAGG GAGGTGCGCC AGGCGATCCT CGACCTCGAG
AGCGCGCGCG CCAACGCCGC GAAGGCCAGG GAGCAGCGCG ACCTGGCCGC CGAGAACCAG
CGCCTCGTCG ACGTCTCCTA CCGCGCGGGG GCCGCCACCG CGGTGGAGCA GGCGGACGCC
ACCGCCGAGC TCCGCAACTC CGAGATCGCC GTCACGACCG AGTCGCTGTC CGCGCAGCTC
GCGGCGGTGA GGCTCCTCCA GGTGGCGGGC GAGTTCGATC CGTTCCGCCG GCTGGAGGCG
GTGCGGCAGC CGGCGCAGTC GCCGGAGGCA GCCGTGCCCG CGCCGCAGCG CTGA
 
Protein sequence
MNAVTAVTML VLAAAQAQEP APSAAPAPQP EQAAPPAAQE GGPQRPSLDA QPAPQPAPAG 
EIITLQQALG IAASRNLDLK ALDARLRQAD EASAQAWAGF LPQLTASGRY TRNERESSIP
EGAFDPGVPG VRPPSPKITI VPKDQLTGQL EATQVLFSPA LWFGIRAAHK GEAVARHSIE
NARRDLLFGV AQAYYGVAAL KQSVEVTERL LEIARRQESD ARVRYQAGTI AKVGYLRAEI
DRARAEQDLR RSRNSYESAR IALATLLDRP VDFEVTDPPE PDLPPDLAQL EEAALRHRND
VQAARRNVEL QRASRNASWG RYFPDVAAFG LYQGQNAAGF SGQETAWAAG VGLSWTLLDG
GLRESQLREG NAKVAEAEAS AASTEALARR EVRQAILDLE SARANAAKAR EQRDLAAENQ
RLVDVSYRAG AATAVEQADA TAELRNSEIA VTTESLSAQL AAVRLLQVAG EFDPFRRLEA
VRQPAQSPEA AVPAPQR