| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_4079 |
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| Symbol | |
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| ID | 5378090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter sp. Fw109-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009675 |
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| Strand | - |
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| Start bp | 4770742 |
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| End bp | 4772706 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640845606 |
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| Product | squalene-hopene cyclase |
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| Protein accession | YP_001381241 |
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| Protein GI | 153006916 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.342218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGCG AGGTCCGCGT CGCGGGGGAC GCCCTCGCCG AGGACGCGGG CCGCGCCGCC
GCGGCCGCCT CGCAGTACCT GTACCGCACG CAGCAGCGCG ATCACTGGCG CGCGGAGCTC
GAGTCGAACG TCACCGTCAC GGCGGAGTAC GTGCTGCTCC GGCAGGCCCT GGGGCTGGAC
CTGGAGGAAC GGCGCGACGC GCTCGTCCGC TACCTGTGCT CCCGCCAGAA GGCCGACGGG
AGCTTCGGCA TCGCCTCGAC CCTGCCCGGC GACGTCTCCA CCACCGCCGA GGCCTACCTC
GCGCTGCGGC TCCTCGGGCT GGACCGGGAG GACGAGCGGC TGCGGGCGGC GGAGCGCTTC
ATCCGCGGCG CGGGGGGCCT CGCCCGCGTG CGGGTGTTCA CGCGCATCAA CCTCGCGCTG
TTCGGCCTCT TCCCCTGGGA GGCGGTGCCC ACGGTGCCGG CGGAGCTGAT CTTCCTGCCG
CGCTGGGCGC CCGTGAACGT GTACCGGCTG GCGAGCTGGG CGCGCTCCAC GATGGTGCCG
CTGTTCGTGC TGTTCCACCA CCGCCCGGTG TTCGCGCTCC CCGGCGGCGC GGGGAGCGAC
TGGCTGGATC ACCTCTGGCT CGGGCCCGGC GACAAGCGGG TCCCCTACCG CACGTCGGTG
ATGGAGACCG TGCGCCGGCA CGGGCCGGGC TGGAAGGCCT TCTTCAACGC GGCCGACGCC
TGGCTCCGCG TGCACGACCG CCTGCGCCAC CTCCCGCCCC TGGGCCGGCT CCGGACCGAG
GCGCTGCGCG CCTGCGAGGA GTGGATCCTC GCGCGGCAGG AGGCGAGCGG CGACTGGGCG
GGGATCTTCC CGCCCATGCT GAACGGCGTG CTCGCGCTCC ACGTGGCCGG CCACGGGCTC
GACGCGGCCC CGGTCCGCCG CGGCCTGGAG GCCATCGAGC GCTTCGCGGT GTCGGACCGG
GAGGGCTTCC GCATCGAGGC GTGCCAGTCG CCGGTCTGGG ACACGATCCT CGCGCTCATC
GGGCTGCTCG ACTCCGGCGA GAGCCCCACC GACCCGCGGC TCGTGGCCGC GCGCCGATGG
ATCGAGGGCA TGCAGCTCAC GAACGACTGG GGCGACTGGA AGGTCTACGA CCCGCGCGGC
GAGCCGGGCG GGTGGGCCTT CGAGTACGCG AACAGCTGGT ACCCGGACGT CGACGACACG
GCCGCGGTGA TCGTGGGGCT CCTGAAGCAC GACCCGGCCT CGCGCGCCGG CGAGACGGTG
CGGCGCGCGG CGGCCTGGGT CGCGAGCATG CAGAACCGGG ACGGCGGCTG GGCCGCGTTC
GACGTGAACA ACGACCGCCT CTTCCTGAAC GAGATCCCGT TCTCGGACAT GGACTCGCTC
TGCGATCCCT CGAGCCCCGA CGTCACGGGA CGGGTCCTCG AGGCGTTCGG GATGCTGGAC
GCGCCGCACC TGCGCGCCGC TTGCCGGCGC GGGGTGGCCT ACCTGCGCCG CGCGCAGGAG
CCGGAGGGGA GCTGGTACGG CCGCTGGGGG GTGAACTACG TCTACGGGAC CTCGAACGTG
CTGAACGGCC TCGCGCGCCA GCGCGTGCCG GCGTCCGACC CGATGGTCGC GCGCGCGCTC
GGCTGGCTCG ACTCGGTGCA GAACGCGGAC GGCGGCTTCG GCGAGGGGCT CGAGTCCTAC
GCGGACCGCG CCGCGATGGG GCGCGGCCCC TCGACCGCGT CGCAGACCGC CTGGGGCGTG
ATGGGCCTGC TCGCGTACCG AGCCGCGGAC GACGCGGCGG TGCGGCGAGG GATCGCGTGG
CTCGTGGAGC GCCAGCTCGC CGACGGCGAG GCGCAGGGCT CGTGGGAGGA GGAGGCGTTC
ACCGGGACGG GCTTCCCGCG CCACTTCTAC CTCCGCTACC ACCTGTACCG GCACTACTTC
CCCCTCATGG CGCTCGGGCG CTTCTGCGCG CAGGGCCGGG GATGA
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| Protein sequence | MSGEVRVAGD ALAEDAGRAA AAASQYLYRT QQRDHWRAEL ESNVTVTAEY VLLRQALGLD
LEERRDALVR YLCSRQKADG SFGIASTLPG DVSTTAEAYL ALRLLGLDRE DERLRAAERF
IRGAGGLARV RVFTRINLAL FGLFPWEAVP TVPAELIFLP RWAPVNVYRL ASWARSTMVP
LFVLFHHRPV FALPGGAGSD WLDHLWLGPG DKRVPYRTSV METVRRHGPG WKAFFNAADA
WLRVHDRLRH LPPLGRLRTE ALRACEEWIL ARQEASGDWA GIFPPMLNGV LALHVAGHGL
DAAPVRRGLE AIERFAVSDR EGFRIEACQS PVWDTILALI GLLDSGESPT DPRLVAARRW
IEGMQLTNDW GDWKVYDPRG EPGGWAFEYA NSWYPDVDDT AAVIVGLLKH DPASRAGETV
RRAAAWVASM QNRDGGWAAF DVNNDRLFLN EIPFSDMDSL CDPSSPDVTG RVLEAFGMLD
APHLRAACRR GVAYLRRAQE PEGSWYGRWG VNYVYGTSNV LNGLARQRVP ASDPMVARAL
GWLDSVQNAD GGFGEGLESY ADRAAMGRGP STASQTAWGV MGLLAYRAAD DAAVRRGIAW
LVERQLADGE AQGSWEEEAF TGTGFPRHFY LRYHLYRHYF PLMALGRFCA QGRG
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