Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_3943 |
Symbol | dapD |
ID | 5376629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 4602543 |
End bp | 4603367 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640845467 |
Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
Protein accession | YP_001381105 |
Protein GI | 153006780 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.993295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0337649 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACT GGAACGAGAT CGAGCGGCGC GTCACGGCCG CGTTCGGCGA CAAGCACAAG CTGGCCGACT CCGTCCACCG CGCGGCCGTG GTGCAGGCGC TGCACGGCCT GGATCGCGGC GAGCTGCGCG TCGCGCAGAA GGTGGACGGT GAGTGGAAGG TGAACGCCTG GCTCATGCAG GCGGTGAACC TCTACTTCGC CATCACCGGC ATGGAGACCC AGGACTTCGG GCCGTTCCAG ACGCGCGACA AGATCCCGCT GAAGAAGAAC CTCGAGGACG CGGGCGTGCG GCTCGTGCCG GGCGGCGTCG CGCGCTTCGG CTCGTTCCTC GAGCCGGGCG CGGTGCTCAT GCCCGGCTTC GTGAACATCG GCGCACGCGT CGGCGCGAAC TCGATGGTGG ACACCTGGGC CACCGTCGGC TCGTGCGCGC AGGTCGGCCA GAACGTCCAC CTCGCCGGCG GCGTCGGCAT CGGCGGCGTG CTCGAGCCGC CCGGAGCGCG GCCGAACATC ATCGAGGACA ACGCCTTCAT CGGCAGCCGC TGCATCCTCG TCGAGGGCGT GCTCGTCGAG GAGGAGGCGG TGCTCGGCGC GAACGTGGTC ATCACCGCGT CGACGCCCAT CATCGACGTC ACCGGCCCGC AGGAGGTGGT GCACAAGGGC CGCGTCCCGG CGCGCTCGGT GGTCATCCCC GGCACGCGCC CGAAGCAGTA CCCCGCGGGC ACCTACCAGA TCCCCTGCGC GCTCATCGTC GGCAAGCGCA GCCCGAGCAC CGACCGGAAG GTCTCGCTGA ACCAGGCGCT GCGCGACTTC GAGGTCCAGG TGTGA
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Protein sequence | MTDWNEIERR VTAAFGDKHK LADSVHRAAV VQALHGLDRG ELRVAQKVDG EWKVNAWLMQ AVNLYFAITG METQDFGPFQ TRDKIPLKKN LEDAGVRLVP GGVARFGSFL EPGAVLMPGF VNIGARVGAN SMVDTWATVG SCAQVGQNVH LAGGVGIGGV LEPPGARPNI IEDNAFIGSR CILVEGVLVE EEAVLGANVV ITASTPIIDV TGPQEVVHKG RVPARSVVIP GTRPKQYPAG TYQIPCALIV GKRSPSTDRK VSLNQALRDF EVQV
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