Gene Anae109_3932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3932 
Symbol 
ID5377014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4592826 
End bp4593428 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content70% 
IMG OID640845457 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001381095 
Protein GI153006770 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0339289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCT CTCTGTACGG AGCTGGTGCC GAGTACGCGC TGCACTCGCT GCTGATCCTC 
GCGGTCCGCT CGGAGCCGGT CAGCGTGCGC GACCTCGCGC GCTTCCAGGA CCTGCCGGAG
CGCTTTCTCG CGAAGCTCTT CACGCGGCTC CAGAAGGCCG GGCTCGTCGA GGCGACGGAG
GGCGTGCGAG GCGGGTTCGC GCTCGCCCGC CCGGCGGCGC GGATCGCGGT GCGCGACGTG
CTCGAGGCCG TCGATCCCAA CCGGACGCTG TTCGAGTGCG CCGAGATCCG GCGCCATTGC
GCGTTGTTCG GCGCGGAGCC GCCGGCCTGG AGCATCTCCG GGATGTGCCG CATCCACCTG
TTCATGAAGG AGGCGGAGGG CGCGCTCCAG GGCTTCCTGG CCTCGAAAAC GCTCGCGGAC
CTGGGCCACG AGTTCGAGCG GAAGGCGCCG GAGCCGTTTC TCCGGGACGC CGAGGCCTGG
TTCCAGGAGC GCAGGGTCGG GCGGACAGCG GCAAGGAGCG GTGGGCGCCG TGGGAAGGCC
CCGGCGGCCC TGAGCTCGAA GCACCCGGCA GTCAACGCAG GCAAAAGGAG AAGTCCTCGA
TGA
 
Protein sequence
MKSSLYGAGA EYALHSLLIL AVRSEPVSVR DLARFQDLPE RFLAKLFTRL QKAGLVEATE 
GVRGGFALAR PAARIAVRDV LEAVDPNRTL FECAEIRRHC ALFGAEPPAW SISGMCRIHL
FMKEAEGALQ GFLASKTLAD LGHEFERKAP EPFLRDAEAW FQERRVGRTA ARSGGRRGKA
PAALSSKHPA VNAGKRRSPR