| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_3880 |
|---|
| Symbol | |
|---|
| ID | 5375806 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 4526362 |
|---|
| End bp | 4527744 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 640845405 |
|---|
| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
|---|
| Protein accession | YP_001381043 |
|---|
| Protein GI | 153006718 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
|---|
| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.769171 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCC CCCGCTTCTC CCCCGACGAG CTGGCCGCCG CGACCGGCGG ACGCTGGATG
GGCGCGCCGC CCGCAGAGCT CGCCGGCGTC TCGACCGACA CCCGCACGAT CGTGCCCGGC
GCGCTCTTCG TCGCGCTCCG CGGCGAGCGC TTCGACGGCC ACGCCTACCT CGGCGAGGCC
TCCGCGAAGG GCGCGGCCGC CGCCGTCGTC GCCCACGGCG CCGCCGCGGG GGCCCCGCTG
CCGGTCCTCG CCGTCCCCGA CACGCTCGCG GCGCTCGGCG CGATCGCGCG CCACCACCGG
CGCCGGTTCC ACATCCCGGT CGTGGGGGTC ACCGGCTCGA ACGGCAAGAC CACCACCCGC
GAGATGATCG CGGGGATCCT CGCCACGCGC GGGCCGGTCC TCAAGACCGA GGGCAACCTC
AACAACGAGG TGGGCGTCCC GCTCACGCTC CTCGGGCTCG GGCCGGAGCA CCGCTCGGCC
GTGATCGAGA TGGGGATGAA CCATCCGGGC GAGATCGCCC GGCTCGCCGC CATCGCCGAG
CCGTACGTCG GGGTCGTGAC GCTCGCCGCC GCCGCGCACC TCGAGGGGCT CGGCACGGTG
GACGCGGTGG CGGACGCCAA GGCCGAGCTG TACCAGGGGC TCCAGGACAC CGGCATCGTG
GTCGCCAACG CGGACGACCC GCGCATGCTG AAGCGGGCGC AGGCCGCCGG CAAGCGCATG
CTGACCTTCG CGGCGGGCGC GGGTCGGCGC GGCGACGTGG TCGTGCTCGA GATCGGCTCG
CAGGGCGACG ACGGCCTCCA CTTCGTGCTC GGCGTCGGCA ACCGCGAGGT CCCCGTGCAC
ATCCCCGGGC TGGTGGGCGC GCACAACGCC GTGAACGCGG CGGCGGCCGC CGCGGCGGCG
ATCTCGCTCG GCTGCAGCGA CCGCGAGATC GCGCAGGGGC TCGCGGCGGT CCGTCCGGTC
GGGCGGCGCC TGCGGCTCGA GCGGCTCGCC TCCGGGCTGC GCCTCGTGGA CGACTGCTAC
AACGCGAACC CGGCGTCGAT GTCGGCCGCG CTCCGCACGC TCGTGGACCT CGCGCGGCCC
GACGCCCGGG CGGTGGCGGT CCTCGGGGAC ATGCTGGAGC TCGGCGCCTT CGAGGAGCCG
GCGCACCGCG AGCTCGGCGG CGAGGCCGCC CGCGCGGGCG TGAGGCTCCT CGCCGCCTTC
GGCCCGCGTT CCCGCGCCAC CGCCGAGGCG GCGCGCGCCG CAGGCCTCGA GACCTTCCAC
ACCGACGACA TGGACGCGCT CGTCCGCTGG GCCCGGACCG CGCTCGCGCC GCCGTCGGAC
GTCCTCCTCG TCAAGGGCAG CCGCGGCATG AAGCTCGAGC GGCTGGTCGA GGCCCTCCGC
TAG
|
|---|
| Protein sequence | MTVPRFSPDE LAAATGGRWM GAPPAELAGV STDTRTIVPG ALFVALRGER FDGHAYLGEA
SAKGAAAAVV AHGAAAGAPL PVLAVPDTLA ALGAIARHHR RRFHIPVVGV TGSNGKTTTR
EMIAGILATR GPVLKTEGNL NNEVGVPLTL LGLGPEHRSA VIEMGMNHPG EIARLAAIAE
PYVGVVTLAA AAHLEGLGTV DAVADAKAEL YQGLQDTGIV VANADDPRML KRAQAAGKRM
LTFAAGAGRR GDVVVLEIGS QGDDGLHFVL GVGNREVPVH IPGLVGAHNA VNAAAAAAAA
ISLGCSDREI AQGLAAVRPV GRRLRLERLA SGLRLVDDCY NANPASMSAA LRTLVDLARP
DARAVAVLGD MLELGAFEEP AHRELGGEAA RAGVRLLAAF GPRSRATAEA ARAAGLETFH
TDDMDALVRW ARTALAPPSD VLLVKGSRGM KLERLVEALR
|
|---|
| |