Gene Anae109_3879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3879 
Symbol 
ID5376883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4524761 
End bp4526365 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content77% 
IMG OID640845404 
ProductUDP-N-acetylmuramyl-tripeptide synthetase 
Protein accessionYP_001381042 
Protein GI153006717 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCGCG CCGCGCCGTG GTGCGTGTCC CGGCGGACAC GACGGCGCGT AACCGGGCGA 
GCGCACAGGG GAAGAGATTC CGGACGGCGG CTTGCATTCC GGTGCGGTGA CATGAAGCTC
TCGGCGGTCA TCCAGGGTAC GGGCGCGCGG GGTGAGGCGG CGGACGATCA CGAGATCGTC
CTCGTCACGG GCGACTCGCG CGAGGTCGTC CCCGGCGCGC TCTTCTTCGC CCTCCCCGGC
GCGGTGCGCG ACGGCCACGA CTTCGCCGCC CAGGCCGCGG CCCGCGGGGC CGTGGCGATC
GTCGCGGAGC GCCCGGTCGC CTGCGCCCCC GCGGCGCTCC TCCTCGTCCC CTCGTCGCGC
CGCGCGATGG CGGTGGCGGC CGCGAACTTC CACGGTCGTC CCGCCGACGC GCTCCGCGTC
GCCGGCGTCA CCGGCACGAA CGGCAAGACG ACCGTCACCT ACCTCGTGGA GGCGTGCGCG
CGCGCGGCGG ACCTGCCCGT CGGCGTGCTC GGCACGGTCA CCCAGCGCTT CCCCGGCGTC
GAGCGCCCCG CCAGCCACAC CACCCCCGAG TCCACCACCC TCCACGCGGT CCTCGCCGAG
ATGCGCGCGG CCGGTACGCG GGCGGTCGTG CTCGAGGTCT CCTCGCACGC GCTCGCGCAG
GAGCGGGTCG GCGGGATGCG CTTCGCGGCG GCGGGGTTCA CGAACCTCAC CCGCGATCAC
CTCGACTACC ACGGCGACAT GGACGCGTAC TTCGCCGCGA AGCGCCGGCT CTTCGCCGAG
CACCTCGCGC CCGACGGCGT CGCGGTGGTG AACGCGCGCG ATCCGTACGG CGCGCGGCTC
GCGGCCCAGC TCGGACCGGG CCGGCGCGTC TGGCGCTACG GCACCCGCGC GGACGACACG
CTGCGGGCCG AGGCCGTCTC GACGGGGCTC GCCGGCATCG CGGCCACCTT CGCGACGCCG
GCGGGGCCGA TCGCGATCCG CTCGCCGCTC GTCGGCGCGC ACAACCTCGA GAACCTGCTG
TGCGCGGCCG GGCTCGCGCT CGCGCTGGGG ATCGCGCCCG ACGCAGTCGG GCGGGGCCTG
TCCGCCTCGG CCGGGGCGCC CGGGCGGCTC GAGCGCATCG ACGGCCGAGG TGTCTCGATC
TTCGTGGACT ACGCCCACAC CGACGACGCG CTCGGCCGCG CGCTGGAGGC GCTCCGCGCC
CTCGCGCCGC GGCGGCTCCT GTGCGTGTTC GGCTGCGGCG GCGATCGCGA TCGCGGCAAG
CGCCCGCTGA TGGGCGAGGT CGCCGCCCGC GGCGCCGACC TCGTGGTGGT GACGAGCGAC
AACCCCCGCA CCGAGGCGCC CGAGGCCATC ATCGCGGACG TCCTGCCCGG CCTCGAGCGG
GCGGGCGCGG CGCGCCTCTC CGCCCGGGCC GCGGCCGACG GCGCGCGCGG CTTCCTCGTC
GAGGCCGACC GCCGCGCCGC GATCGCCCTC GCAGTCTCCC TCGCGCACCC CGGCGACGCC
GTGCTCGTCG CCGGCAAGGG GCACGAGGAC TACCAGCTCG TCGGCACGAC GAAGCACCCC
TTCTCCGACC GCGAGGAGGC CCGGAAGGCC CTCGGCTTCG TATGA
 
Protein sequence
MCRAAPWCVS RRTRRRVTGR AHRGRDSGRR LAFRCGDMKL SAVIQGTGAR GEAADDHEIV 
LVTGDSREVV PGALFFALPG AVRDGHDFAA QAAARGAVAI VAERPVACAP AALLLVPSSR
RAMAVAAANF HGRPADALRV AGVTGTNGKT TVTYLVEACA RAADLPVGVL GTVTQRFPGV
ERPASHTTPE STTLHAVLAE MRAAGTRAVV LEVSSHALAQ ERVGGMRFAA AGFTNLTRDH
LDYHGDMDAY FAAKRRLFAE HLAPDGVAVV NARDPYGARL AAQLGPGRRV WRYGTRADDT
LRAEAVSTGL AGIAATFATP AGPIAIRSPL VGAHNLENLL CAAGLALALG IAPDAVGRGL
SASAGAPGRL ERIDGRGVSI FVDYAHTDDA LGRALEALRA LAPRRLLCVF GCGGDRDRGK
RPLMGEVAAR GADLVVVTSD NPRTEAPEAI IADVLPGLER AGAARLSARA AADGARGFLV
EADRRAAIAL AVSLAHPGDA VLVAGKGHED YQLVGTTKHP FSDREEARKA LGFV