| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_3802 |
|---|
| Symbol | |
|---|
| ID | 5376515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 4431606 |
|---|
| End bp | 4433378 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 640845327 |
|---|
| Product | malto-oligosyltrehalose trehalohydrolase |
|---|
| Protein accession | YP_001380965 |
|---|
| Protein GI | 153006640 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.300682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.0163414 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGTC ATTCCCACGG CCCCACGTTC CTGCGCGACG GCCGCGTGCG TTTCGAGGTC
TGGGCCCCGC GGATGAGGAG CATCGCGGTC CGCATCTCGG GCCGGGAGCA TCCGCTCGAG
CCTCGCGAGG GGGGATGGTT CGCCGCCGAG GTCTCCGGCG CCGGCGACGG CGCGCGCTAC
GAGCTCGTGC TGGAGGACGG CCGGAACCGG CCGGACCCCG CGTCGCGGCG CCAGCCGGAC
GGCGTGCACG GGCCCTCGCA GCTGTTCGAT CCGGCGCGGC ACGCGTGGCG AGACGGGGCG
TGGAAGGGCC TCCCGCGCGA GGCGCTCGTC TTCTACGAGC TGCACGCGGG GACGTTCACG
CCGGAGGGGA CGCTCGACGC GGGGGCGGCG CGCCTCCCGG ACCTCGTGGA CCTCGGCGTC
ACCTGCGTGG AGCTGATGCC CGTCCAGCCG TTCCCGGGCG CGCGCAACTG GGGCTACGAC
GGCGTCGAGC TCTATGCGGT GCACGAGGCG TACGGCGGCC CGGTCGCGCT CCAGCGCTTC
GTCGACCGCG CGCACGGCCT CGGCCTCGCC GTGTGTCTCG ACGTCGTCTA CAACCACCTC
GGCCCGGAGG GGAACTACCT CGGGGAGCTC GCCCCGTACT TCACGAACCG TCACCGATCG
CCGTGGGGCG ACGGGCTCGA CTTCGACGGA CGGGCGTCCG GGCCGGTCCG CGGCTTCATG
ATCGGCGCGG CGGTGCAGTG GATCCGCGAC TTCCACGTGG ACGCCCTGCG GCTCGACGCG
ACGCACGCGA TCCCGGACGA CTCCCCTTCG CACCTCGTCG CGGAGCTCGG CGAGGCCGTG
CGCGCCGCGG GCCGCGCCGC CGGCCGCGAG GTCCACGTCG TCGCCGAGAA CGACGAGAAC
GACCGGAAGG TGCTCGACCC GCCGCCGCGC GGGTGGGGCG CGTCCGCGGT CTGGGCCGAC
GATCTCCACC ACGCGCTGCA CGCGCTCGTC ACCGGCGAGC GGCAGCGCTT CCTCGGCGAC
TTCGGCCGCC CGGAGGACGT GTCGCGCGCG CTCGCGGAGG GCTTCGTGTA CCAGGGCCAG
CGCTCCTCCT ACCGCAAGCG GGGGCACGGC ACCGACGTCC GGGGGCTGCC GCCCTCGCGG
TTCGTCACGT GCCTGCAGAA CCACGACCAG GTCGGCAACC GGCCGCGCGG GGAGCGGCTC
TCCACCCTCG TCCCCTTCGA CGCCCTCTAT CCGCTCTCGA CCCTCGTCGT GCTGGGCGCG
GGGCTCCCGC TCCTGTTCAT GGGCGAGGAG TACGGCGAGC AGCGGCCGTT CCTGTACTTC
ACGAGCCACG GAGACCCCGC GCTCGCGAAG GCGGTCTCCG AGGGGAGGAA GAACGAGTTC
ATCGCCGAGG GCGAGGAGGA GGTGCCGGAT CCGCAGGAGG AGGAGACCTT CGTGCGCTCC
AAGCTGACGC ATCGGCGCGA CGGCCGGCAC GGCGCGCTCC GGGAGCACTA CCGGCGGCTG
CTCGCCGTCC GGAGGACGCA CCGCGCCGAG ATCACCGGGG AGTGGCCGCT CGTGGAGTGC
GAGGGCACGG CCTTCTCCCT CGTGCGACCC GGGCTCGTGG TGCGCGCGAA CCTCGGCGCG
AGCCCGGCGG GCGGGCTGCC GGCGTGGGGC GTCGAGATCG AGGAGCGCGG CCCGGCGCGG
ACGGAAGGAG CGGGGCCCGA TCCTCGCGCG CAGGCGGCCG CGAGCGGGGA TCCCCCGCAC
CTGTTCCAGA AGGGCGAGGG GCTCGCGGAG TAG
|
|---|
| Protein sequence | MTRHSHGPTF LRDGRVRFEV WAPRMRSIAV RISGREHPLE PREGGWFAAE VSGAGDGARY
ELVLEDGRNR PDPASRRQPD GVHGPSQLFD PARHAWRDGA WKGLPREALV FYELHAGTFT
PEGTLDAGAA RLPDLVDLGV TCVELMPVQP FPGARNWGYD GVELYAVHEA YGGPVALQRF
VDRAHGLGLA VCLDVVYNHL GPEGNYLGEL APYFTNRHRS PWGDGLDFDG RASGPVRGFM
IGAAVQWIRD FHVDALRLDA THAIPDDSPS HLVAELGEAV RAAGRAAGRE VHVVAENDEN
DRKVLDPPPR GWGASAVWAD DLHHALHALV TGERQRFLGD FGRPEDVSRA LAEGFVYQGQ
RSSYRKRGHG TDVRGLPPSR FVTCLQNHDQ VGNRPRGERL STLVPFDALY PLSTLVVLGA
GLPLLFMGEE YGEQRPFLYF TSHGDPALAK AVSEGRKNEF IAEGEEEVPD PQEEETFVRS
KLTHRRDGRH GALREHYRRL LAVRRTHRAE ITGEWPLVEC EGTAFSLVRP GLVVRANLGA
SPAGGLPAWG VEIEERGPAR TEGAGPDPRA QAAASGDPPH LFQKGEGLAE
|
|---|
| |