Gene Anae109_3779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3779 
Symbol 
ID5374455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4403709 
End bp4404407 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content75% 
IMG OID640845304 
Productputative PTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_001380942 
Protein GI153006617 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00106137 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCA CGACGCGCGA CGCAGCCCGC CTCCTCGGCG TCTCGGACTC GACGCTCCAC 
CGCTGGCTCA AGAGCGGGGA GCTCCACGCC ACGCGGGTGA ACGACCAGTA CCGGCTCAAC
CGGATCGATC TGCTGGAGTT CGCCGCCGCG CGGAACGTGC CCATCTCCGC CGAGCTCCTC
GCCGAGCTCG AGACGGAGGC CCCGGAGCTG CCGAGCCTCG CGGACGCGCT GCGGGCCGGC
GGCGTCCACC GCGGCCTCGC CGGCGCGGAC AAGGCGGCCA TCCTGCGAGC GGTCGTGGAG
CGGCTGCCGC TCCCGCGTCC CGCCGATCGC GACCTCCTCC ACCGGGTCCT CCTGGCGCGC
GAGGCGCTCG GCTCGACCGG GCTCGGCAAC GGCATCGCCA TCCCCCACGC CCGCAACCCG
ATCGTGCTGC GCATCCCGAA GCCGGAGGTG GCGGTCTGCT ACCTCGATCA GCCGGTCGAG
TTCGGCGCCA TCGACGGGAA GCCCGTGCAC ACGCTCGTCA CGCTCGTGAG CCCGTCCACG
CGCGTGCACC TCCACCTGCT CGCCCTCGTC GCCGCGGCGC TGCACGACCC CTCCGTCCTC
GCGCGGCTCG AGGCGCGCGC CGGCGCGGAG GAGCTCGTGC CCGAGATCGC GCGCGTCGAG
GCGGCCATCG CCGCGCAGCG CGCCGGGGGC GCCCGGTGA
 
Protein sequence
MQLTTRDAAR LLGVSDSTLH RWLKSGELHA TRVNDQYRLN RIDLLEFAAA RNVPISAELL 
AELETEAPEL PSLADALRAG GVHRGLAGAD KAAILRAVVE RLPLPRPADR DLLHRVLLAR
EALGSTGLGN GIAIPHARNP IVLRIPKPEV AVCYLDQPVE FGAIDGKPVH TLVTLVSPST
RVHLHLLALV AAALHDPSVL ARLEARAGAE ELVPEIARVE AAIAAQRAGG AR