Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_3725 |
Symbol | |
ID | 5375329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 4340425 |
End bp | 4342380 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640845246 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_001380888 |
Protein GI | 153006563 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.191772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCCCG CGGACGCTGC CGAGGCGCCC GTGCCCTTTC GCAGCGACGA GAAGCCGGTC ATCTGGGCGT TCAGCTCGAG CCGGCTGCGC CAGGTGCTCG AGAGCGCCGC CCCCATCTAC GCGGACCGCG CCGAGGTGCG CGTCTTCGAC CTGAGCTTCG AGGGCGCGCT CGAGACGGCG CAGAGCCTCA CCGAGGCGGA CGAGCGGGTG GACGCGTTCG TCGCCGCCGG CTCCAACGGC GCGTACCTGC GCGACCACGG GCCCGTCCCC GTGGCGCTGG TGGACGTCTC GACCACCGAC GCGCTCCAGG CGCTCGCGCA CGCGCGCACC CTCGGGCGCC GCGTCGGCGT GGTGAACTTC CGCCGCGTGC TGCCCGGCCT CGAGCGCTGG AAGGACCTCC TGCGCGGCGT CCAGATCGAG CAGCGCGCCT ACGTCACCCC CGAGGAGGCC CGGGCCGCCG TGGCGGAGCT CGCGGCCCAC GGCTTCGAGG TGGTGGTGGG CCCCGGCCCC GCCTGCGACG AGGCCGAGCG CGCCGGCCTG AAGTCGGTGC TCCTCTACTC GCTGGAGTGC GTCTGCGCGA CCATCGAGCG GGCCATCGAG ATGGCGCAGG TCGCGCGGGC GGAGCGGGGG CGGCGCGAGC AGCTCGCGGG CGTCATCGCC CACATCGACG AGGCCGTCGT CGCGGTGGAC GCGGCCGAGC GGATCGCGGT GGTGAACCCC GGCTTCGAGC GGCTGCTCGG CGCGCGCGGG GTGGAGCTCG TGGGCAAGCG CCTCTCGAGC GTCGCACCCG AGCTGTCCCT GGCCCGGGTC CTCGAGACGG GCGCGCCCGA GCTGCGGTCG TTCCAGAAGC TCGGCGGGCG CAGCCTCGTC GTGAGCCGCA TCCCCGTGCG CCAGCGCGGT GTCCTCTCCG GCGCGGTGCT CACCTGCCAG GACTCGAGGA CGCTCCTGCG CGTGGACCGT GACCTCCGCT CCGAGCTCCG GCCGCGCCGC TTCATCGCCC GCTACGAGCT CGCGGGGATC GTGGGCACGT CGGAGGCCAT CCGGACGGTG CGGACCCTCG CCGAGCAGTA CGCCGGGACC GAGGGGACCG TCCTCATCAC GGGCGAGAGC GGCACCGGCA AGGAGATGAT CGCGCAGGGC GTCCACAACG CCGGGCGGCG CCGCGACCGG CCCTTCGTCG CCATCAACTG CGCCGCCTTC CCCGAGGCGC TGCTCGAGTC GGAGCTGTTC GGCTACGAGG AGGGCGCCTT CACCGGCTCG CGCCGCGGCG GGCGGGCCGG GCTCTTCGAG GCCGCCCACA CCGGCACGAT CTTCCTCGAC GAGGTCGGAG ACGTCCCCAT CACGCTTCAG ACCCGCCTCC TGCGCGTGCT GCAGGAGCGC CAGGTGCTGC GGCTCGGCAG CAACGACCCG ACCCCGATCG ACGTCCGGGT GGTCGCCGCG ACGAACCGCG ATCTCAAGCG CGAGATCGCG CGCGGCGCCT TCCGCGAGGA TCTCTACTAC CGGCTCAACA TCCTCCCCAT CCACCTGCCG CCGCTGCGGG CGCGGCGAGA CGACGTGGCG CCCATCGCCG AGGCGCTCCT GCGCGACGCG CTCGCGCGCC ACGGCGTGCC GGACGCGCTC CCGCGGGCGC TCGCCCTGCT CCTCCCCTGG CTCCAGGGCT ACGCCTGGCC GGGGAACGTC CGCGAGCTCG AGAACGTGCT GGAGCGCATC GCGGTCCTCT ACTCGCACCG GGCCCCGGAC CAGGTCGGAT CGGAGGCCTT GCGCGCCGTG CTCCCGGAGC TGTTCCAGGT CGCGGACGAG CCGCGAGACG GCGATCTCCG CAGCGCCCGC GAGGCCCAGG AGGCGGCGGT GATCCGGCGC GTGGTCGAGG AGTGCGGCGG CAACATGAAG GCGGCCGCCA AGCGGCTGGG CGTGGGACGC TCCACGCTTT ACCGCAAGCT GAGAACGGCG GGGTGA
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Protein sequence | MSPADAAEAP VPFRSDEKPV IWAFSSSRLR QVLESAAPIY ADRAEVRVFD LSFEGALETA QSLTEADERV DAFVAAGSNG AYLRDHGPVP VALVDVSTTD ALQALAHART LGRRVGVVNF RRVLPGLERW KDLLRGVQIE QRAYVTPEEA RAAVAELAAH GFEVVVGPGP ACDEAERAGL KSVLLYSLEC VCATIERAIE MAQVARAERG RREQLAGVIA HIDEAVVAVD AAERIAVVNP GFERLLGARG VELVGKRLSS VAPELSLARV LETGAPELRS FQKLGGRSLV VSRIPVRQRG VLSGAVLTCQ DSRTLLRVDR DLRSELRPRR FIARYELAGI VGTSEAIRTV RTLAEQYAGT EGTVLITGES GTGKEMIAQG VHNAGRRRDR PFVAINCAAF PEALLESELF GYEEGAFTGS RRGGRAGLFE AAHTGTIFLD EVGDVPITLQ TRLLRVLQER QVLRLGSNDP TPIDVRVVAA TNRDLKREIA RGAFREDLYY RLNILPIHLP PLRARRDDVA PIAEALLRDA LARHGVPDAL PRALALLLPW LQGYAWPGNV RELENVLERI AVLYSHRAPD QVGSEALRAV LPELFQVADE PRDGDLRSAR EAQEAAVIRR VVEECGGNMK AAAKRLGVGR STLYRKLRTA G
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