| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_3704 |
|---|
| Symbol | |
|---|
| ID | 5374730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 4316934 |
|---|
| End bp | 4318109 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640845225 |
|---|
| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| Protein accession | YP_001380867 |
|---|
| Protein GI | 153006542 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.551924 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATAGAGA TTCGCTCCGT GAAGCGCGTC GCCATCCTCG GCTGCACCGG CTCCATCGGC
GTCCAGGCGC TCGACGTGGC TGGCCGCTTC CCCGATCGGT TCCAGGTGGT CGGGCTCGCC
GCCGGTCGCA ACGGGGCCCG GCTCGCCGAG CAGGTCCTGC GCTTCCGGCC GCGCGTGGTG
TCCGCGGCCG ACGAGGCCAC CGCGCGCGCC GTCCGCGAGA TCGCCCCGCC TGGCACGGAG
GTCCTCGCCG GGGAGGGTGG GGCGGTCGCG GTGGCCTCGC ACGCCGACGT CGACTTCGTG
CTCGCGGCGA TCTCCGGCGG CGCGGGGCTG CGCTCCACGG CGGCGGCCAT CGAGGCCGGC
AAGCCGGTGG GCCTCGCCAA CAAGGAGTCG CTCGTGCTCG CGGGCGAGCT CCTCACGGCG
CGCGCCGCCG CGCGGCGCGT GCCCATCCTC CCGGTGGACT CCGAGCACAG CGCCATCCAC
CAGTCGCTCG TCGGTCACAA CCGGCGCGAG GTGCGGCGCC TCATCCTCAC CGCCTCGGGC
GGACCGCTGC GCCTCGTGCC CGCCGAGGAG CTCGCGGGGG TCGGCCCCGA GCGCGCCCTC
AAGCACCCGA ACTGGTCGAT GGGCGACAAG ATCACCATCG ACTCCGCGAC CCTGATGAAC
AAGGGGCTCG AGGTGATCGA GGCGCGCTGG CTCTTCGGCG TCGAGCCGAG CCGCATCGAC
ATCGTCGTTC ACCCCGAGTC GATCGTGCAC TCGATGGTGG AGTACATCGA CGGCTCGATG
GTGGCGCAGC TCGGCGTCTC CGACATGCGC GGCCCCATCA GCTACGCCAT GGGGCACCCC
GAGCGCCTGC CGCTGGAGCT GCCGCCGCTC GATCTCGCCC GGCTGGGCAA GCTCACCTTC
GAGCAGCCCG ACCCCGCCCG CTTCCCGGCG TACATGCTCG CCTACCGCGC GCTGGAGCTC
GGGGGCACCG CGCCGGCCGT CCTCTCCGGG GCGGACGAGG CGGCGGTGGC CGCGTTCCTC
GCCCGGCGCT GCCGGTTCCT GGACATCGCC GACGTCTGCG CCGCGGTGCT CGAGGCGCAC
GTGGTCGAGC CCGTGCGGAG CGTCGAGCAG GCGCTCGCCG CGAGCGAGTG GGGACGCAGA
GAGGCAGAGC GCCGGGTCGC CCGTACGGGG GCGTAG
|
|---|
| Protein sequence | MIEIRSVKRV AILGCTGSIG VQALDVAGRF PDRFQVVGLA AGRNGARLAE QVLRFRPRVV
SAADEATARA VREIAPPGTE VLAGEGGAVA VASHADVDFV LAAISGGAGL RSTAAAIEAG
KPVGLANKES LVLAGELLTA RAAARRVPIL PVDSEHSAIH QSLVGHNRRE VRRLILTASG
GPLRLVPAEE LAGVGPERAL KHPNWSMGDK ITIDSATLMN KGLEVIEARW LFGVEPSRID
IVVHPESIVH SMVEYIDGSM VAQLGVSDMR GPISYAMGHP ERLPLELPPL DLARLGKLTF
EQPDPARFPA YMLAYRALEL GGTAPAVLSG ADEAAVAAFL ARRCRFLDIA DVCAAVLEAH
VVEPVRSVEQ ALAASEWGRR EAERRVARTG A
|
|---|
| |