Gene Anae109_3686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3686 
Symbol 
ID5375527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4299156 
End bp4299785 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content73% 
IMG OID640845207 
Productlytic transglycosylase catalytic 
Protein accessionYP_001380849 
Protein GI153006524 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCC CGCGCTCCCT CGTCGGCCTC GCCCTCGTGG GGCTCCTCTC CGCGCCCGCG 
CTCGCGTCGG CCGGTGACGT CTACTCGTAC GTCGACGCCG ACGGCGTGGT CCACTTCTCC
AACGCCCCCG ATGACCCCCG CTACAAGCGC GTGCACCGCT CGCGGAGCGG CGGCGGCGTC
TACCAGTCGG GCTCGCGTCC CCAGGCGCGC GCGCGGCGGG CGTCGAGCGA TCGCCAGCGC
GAGTGGCGCG AGCACATCGC GGCGGCGGCC CAGCGCTACG CGCTGCCCGA GGCGCTGCTC
CTCGCCGTGA TGTCGGTGGA GTCGAACTTC GACCAGCGCG CGCTGTCGGA GAAGGGCGCG
ATGGGGCTCA TGCAGCTCAT GCCGGGGACG GCGAAGGACA TGTTCGTGTC CGACGCGTGG
GATCCCGGGC AGAACATCGA GGGCGGCGCG CGCTACCTGC GCATCCTCGC GAACCAGTAC
CAGGGCGACC TCGTGAGGAC CCTCGCCGCG TACAACGCCG GGCCCGAGGC GGTCCGCCGC
GCGGGTGGCG ACGTCCCGAA CATCCCGGAG ACGCGCGAGT ACGTCCGCAA GGTCGTCGCC
CTGTACGAGG CCTTCAAGGC CGGGAAGTGA
 
Protein sequence
MSGPRSLVGL ALVGLLSAPA LASAGDVYSY VDADGVVHFS NAPDDPRYKR VHRSRSGGGV 
YQSGSRPQAR ARRASSDRQR EWREHIAAAA QRYALPEALL LAVMSVESNF DQRALSEKGA
MGLMQLMPGT AKDMFVSDAW DPGQNIEGGA RYLRILANQY QGDLVRTLAA YNAGPEAVRR
AGGDVPNIPE TREYVRKVVA LYEAFKAGK