Gene Anae109_3615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3615 
Symbol 
ID5375873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4230514 
End bp4231275 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content71% 
IMG OID640845137 
Producthypothetical protein 
Protein accessionYP_001380780 
Protein GI153006455 
COG category[R] General function prediction only 
COG ID[COG4588] Accessory colonization factor AcfC, contains ABC-type periplasmic domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.520257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.00533129 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCACCT CGCTCCGTCT CGTCACGATC GTCTCGCTGG CCCTCCACTC CGGCGGCGCG 
CTCGCGCAGG AAGCGCTCCG CGCCTACGGC CCCGGCGGAC CGGCGCCCGC GATGAAGGAG
GCCGCCGAGG CGTTCTCGCG GGCGCGCAGG GTGAAGGTCG AGGTGACCGC CGGCCCCACC
GATACCTGGC TCGCGAAGGC ACGCCAGGAC GCGGATCTCA TCTTCAGCGG CGCCGAGTAC
ATGATGACGG ATTTCGTGAA CGCGCTGGAG GGACGCGTGG ACGAGGCGAC CATCGTGTCG
CTCTACCTGC GTCCCTCCGC CATCCTGGTC CGCCCGGGCA ACCCGAAGCG CATCCAGGGC
CTGCCCGATC TCGCGAAGCC CGGGCTGAAG GTGCTCGTCG TGCAGGGCGC CGGGCAGACC
GGGCTCTGGG AGGACATGGC CGGCAAGCAA GGCGACCTCG GGCTCGTTCG CGCGCTCCGG
CGGAACATCG TGCACCACGC GCCGAACACG GGCGCCGCGA AGCAGACGTG GACGGAGCGC
CCGGAGATCG ACGCCTGGAT CGTCTACAAC ATCTGGCAGG TGGCGAACCC GGCCCTCGCG
GACCTCGTGC CCGTCGGCAA GGAGCACGTC ATCTACCGGA GCTGCGGTGC CGCCCTCACG
AAGAAGGGCG CCGCGCGCCC GGAGGCGAGG CGGTTCCTCG AGTTCCTCCA GTCGGCAGAA
GGCGCGGCGA TCTTCCGGAG GTGGGGCTGG ATGGTCCCGT GA
 
Protein sequence
MPTSLRLVTI VSLALHSGGA LAQEALRAYG PGGPAPAMKE AAEAFSRARR VKVEVTAGPT 
DTWLAKARQD ADLIFSGAEY MMTDFVNALE GRVDEATIVS LYLRPSAILV RPGNPKRIQG
LPDLAKPGLK VLVVQGAGQT GLWEDMAGKQ GDLGLVRALR RNIVHHAPNT GAAKQTWTER
PEIDAWIVYN IWQVANPALA DLVPVGKEHV IYRSCGAALT KKGAARPEAR RFLEFLQSAE
GAAIFRRWGW MVP