| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_3588 |
|---|
| Symbol | |
|---|
| ID | 5373935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 4202483 |
|---|
| End bp | 4203190 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 640845110 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001380753 |
|---|
| Protein GI | 153006428 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.00143564 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGCCG CGCGAGGGCG CGTCGCGCTC GTCACCGGCG CCGGCGTGCG GGTGGGCCTC
GCGATCGCCC GCGACCTCTC CCGCCACGGC TGGACCGTCG TCCCCCACTA CCGCTCGCAC
CCTCCGCGTG GCCTCCCCGG CGCGCTGCAG GCGGATCTGG CCGCGCCGGA CGGGCCCGCC
GCGCTCGCCG CCGCCTTCGC CCGGGACCAC CGCCGCCTGG ACCTGCTGGT GAACAGCGCC
GCCGCGTTCG AGGCCCTGCC GCTCGAGGAG ACCGACGCGG CCGCGTTCGA CTCGCAGATG
GACCTCAACG CGCGCGCGCC GCTCCTCCTG TCGCGCGCGC TCCTCCCCCT GCTCTCCCGC
TCGCGGGGCG TCATCGTGAA CGTCGCCGAC GTGGGCGGCG GCCTGGTCCC GTGGCGGGGC
TTCGCGGCCT ACGCGGCGTC CAAGGCTGCG CTCGTCCGCC TGACCGAGTG CCTCGCGCTC
GAGCTCGCCC CTCGCATCCG GGTGAACGCG GTGGCTCCCG GGACGGTCCT GTGGCCGGAG
AGCTATCCGG CGAAGCGGCG CCGGGAGCTC GTCGCTCGCA TCCCGCTCGG GCGGGCCGGG
ACGCCGGACG ACGTCGCGGC GGCCGTTCGC TTCCTGGCGG ATGCTCCTTT CGTGACGGGC
GCGGTCATCC CCGTCGATGG CGGCCGGCAC CTCTCCGGCC GCGCTTGA
|
|---|
| Protein sequence | MSAARGRVAL VTGAGVRVGL AIARDLSRHG WTVVPHYRSH PPRGLPGALQ ADLAAPDGPA
ALAAAFARDH RRLDLLVNSA AAFEALPLEE TDAAAFDSQM DLNARAPLLL SRALLPLLSR
SRGVIVNVAD VGGGLVPWRG FAAYAASKAA LVRLTECLAL ELAPRIRVNA VAPGTVLWPE
SYPAKRRREL VARIPLGRAG TPDDVAAAVR FLADAPFVTG AVIPVDGGRH LSGRA
|
|---|
| |