Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_3557 |
Symbol | |
ID | 5378194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 4170788 |
End bp | 4171357 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640845079 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001380722 |
Protein GI | 153006397 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0683868 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.0254908 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACG ATCGTGCCGG CGCGCTCATC GACGCGGGGC AGCTGGGGGC GGGGGCCGAG GCGATCGTCC GCGACTACGG CGCGCAGATC CTCGGGTACC TCACCTCGAT CCTGCGCAAC GACGCGGACG CGGCGGAGGT GTTCTCCCAG TTCACCGAGG ACCTGTGGCG GGGGCTGCCC GGCTTCCGCG GCGAGTGCCC GGTGCGCGTG TGGGCGTACC GCCTCGCGTG GCACGCCGCG GCGCGCTACC TGCGCGACCC GTACCGGCAG CGCGGCCGCC GGCTCGAGAC GACCGAGCTG TCCCGCATCG CGGAGGAGGT CCGCTCGAGC GTGCTCCTCG GGCGCCGCGA GGCGCGCCAG CGCGGCATCG ACCGGCTGCG CGCGCGCCTC TCGCCCGACG AGCAGACGCT GCTCGTGCTG CGGCTCGACC GCGGGCTGTC CTGGCGCGAG GTCGCCACGG TGCTCGCCGA CGACGGCGCC GCGGTCGACG AGGCCGCCCT CCGGAAGAGA TTCGAGCGGC TGAAGGACCG CCTCGCGCAG ATGGCGCGCG AGGAGGGACT CCTCGAATAG
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Protein sequence | MNDDRAGALI DAGQLGAGAE AIVRDYGAQI LGYLTSILRN DADAAEVFSQ FTEDLWRGLP GFRGECPVRV WAYRLAWHAA ARYLRDPYRQ RGRRLETTEL SRIAEEVRSS VLLGRREARQ RGIDRLRARL SPDEQTLLVL RLDRGLSWRE VATVLADDGA AVDEAALRKR FERLKDRLAQ MAREEGLLE
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