Gene Anae109_3557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3557 
Symbol 
ID5378194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4170788 
End bp4171357 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content75% 
IMG OID640845079 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001380722 
Protein GI153006397 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0683868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0254908 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG ATCGTGCCGG CGCGCTCATC GACGCGGGGC AGCTGGGGGC GGGGGCCGAG 
GCGATCGTCC GCGACTACGG CGCGCAGATC CTCGGGTACC TCACCTCGAT CCTGCGCAAC
GACGCGGACG CGGCGGAGGT GTTCTCCCAG TTCACCGAGG ACCTGTGGCG GGGGCTGCCC
GGCTTCCGCG GCGAGTGCCC GGTGCGCGTG TGGGCGTACC GCCTCGCGTG GCACGCCGCG
GCGCGCTACC TGCGCGACCC GTACCGGCAG CGCGGCCGCC GGCTCGAGAC GACCGAGCTG
TCCCGCATCG CGGAGGAGGT CCGCTCGAGC GTGCTCCTCG GGCGCCGCGA GGCGCGCCAG
CGCGGCATCG ACCGGCTGCG CGCGCGCCTC TCGCCCGACG AGCAGACGCT GCTCGTGCTG
CGGCTCGACC GCGGGCTGTC CTGGCGCGAG GTCGCCACGG TGCTCGCCGA CGACGGCGCC
GCGGTCGACG AGGCCGCCCT CCGGAAGAGA TTCGAGCGGC TGAAGGACCG CCTCGCGCAG
ATGGCGCGCG AGGAGGGACT CCTCGAATAG
 
Protein sequence
MNDDRAGALI DAGQLGAGAE AIVRDYGAQI LGYLTSILRN DADAAEVFSQ FTEDLWRGLP 
GFRGECPVRV WAYRLAWHAA ARYLRDPYRQ RGRRLETTEL SRIAEEVRSS VLLGRREARQ
RGIDRLRARL SPDEQTLLVL RLDRGLSWRE VATVLADDGA AVDEAALRKR FERLKDRLAQ
MAREEGLLE