Gene Anae109_3550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3550 
Symbol 
ID5378262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4160427 
End bp4161884 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content79% 
IMG OID640845072 
Productalcohol dehydrogenase 
Protein accessionYP_001380715 
Protein GI153006390 
COG category[F] Nucleotide transport and metabolism
[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00982033 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCCTCG ACGCAGACAC CTGCTTCGGC GCGCTGGCGG CGCGCGATCC CCGCTTCGAC 
GGCCGCTTCT TCGTGGGCGT GCGGACCACC GGCATCTACT GCCGGCCCAT CTGCCCGGCC
CGCACGCCGC GCCGCGAGCG CTGCGTGTTC TTCGCGCGGG CGGCGGAGGC GGAGCGGGAG
GGGTTTCGCG CCTGCTTCCG CTGCCGTCCC GAGCTCGCGC CCGGCGGCGG ACCGGTGGAC
GCGATCCCGC GCCTCGTGTC CGCGGCCGCG GCGCGGATCC AGGAGGGGTT CCTCAACGAG
GGCTCGGTGG ACGCGCTGGC GGCGGGGCTG GGCGTCACGC CGCGGCACCT GCGCCGCGCG
ATGGCCGCCG AGCTGGGCGT CACGCCGGTC GAGCTCGCGC AGTCGCGCCG CATGGCGCTC
GCGAAGCAGC TGCTCCACGA CACCGCGCTC CCGATGGCGG AGGTGGCGTT CGCGGCCGGC
TTCTCGAGCC TGCGCCGGTT CAACGCGCTC TTCCAGCAGC GCTTCGGCCG TCCGCCCTCG
GCGCTCCGGC GCGCCCACGG CGACGGCGCC GCGCCGGCCT CGCTCGTCCT CCGCCTGGAC
TTCCGCCCCC CGCTCGACTG GGAGGCGCTG CTCGCCTTCC TCGCCGCGCG GTGCACGGCG
GGCGTGGAGC AGGTCGAAGG CGGCGCGTAT CGCCGCACGG TGCGCCTCGG CGGCCGGACC
GGCTGGGTGT CGGTCACGCG CGATCCGGCC CGGCCGACCG CGCTGCGCGC CGAGGCGTCG
CTCTCGCTCG CGGGAGCGCT CATGCCGCTC GCGGCGCGCC TGCGCGCCCA GCTCGACCTC
GACGCGCGCC CCGACGCGGT GGCGTCCCGG CTGCGGCGCG ATCCGCTGCT CGCGCGCGCG
CTCCGGCGCC ACCCGGGGCT GCGGGTCCCC GGGGCGTTCG ACGGCCTCGA CGCGGCGGTG
CGCGTGATCG TCGGCCAGCA GGTCAGCGTC GCGGCGGCGA CCACCGTGAG CGGCCGGCTG
GCCGCGGCGC TGGGGGAGCC CGTGGCGACG CCGTTCCCCG GGCTGGACCG GCTGGCTCCA
TCCGCGGAGG CGATCGCGGC GGCCGGCGTC GATGCGATCG CGCGCGTCGG CATGCCGGGC
GCGCGCGCCC GGACGATCCT GGAGCTGGCG CGCGCCGTGG CCGGGGGCGG GCTCGCGCTC
CACCGGGGCG GCGACGGCGA GGCCGTGCGG GCCGGCCTCC TCGAGCTGTC GGGCGTGGGC
CCGTGGACCG CGGAGGTCGT CGCCATGCGC GCGCTCGGCG AGCCGGACGC GTTTCCGGCC
TCGGACCTCG GCGTGCTGCG CGCGCTGGGC GCGTCGTCGG CGCTCGAGGC CGAGGCGCGC
GCCGAGGCGT GGCGCCCGTG GCGCTCGTAC GCGGTGATGC ACCTGTGGTC CCGGGCGGCG
AGAGGAGGAG GAGCATGA
 
Protein sequence
MTLDADTCFG ALAARDPRFD GRFFVGVRTT GIYCRPICPA RTPRRERCVF FARAAEAERE 
GFRACFRCRP ELAPGGGPVD AIPRLVSAAA ARIQEGFLNE GSVDALAAGL GVTPRHLRRA
MAAELGVTPV ELAQSRRMAL AKQLLHDTAL PMAEVAFAAG FSSLRRFNAL FQQRFGRPPS
ALRRAHGDGA APASLVLRLD FRPPLDWEAL LAFLAARCTA GVEQVEGGAY RRTVRLGGRT
GWVSVTRDPA RPTALRAEAS LSLAGALMPL AARLRAQLDL DARPDAVASR LRRDPLLARA
LRRHPGLRVP GAFDGLDAAV RVIVGQQVSV AAATTVSGRL AAALGEPVAT PFPGLDRLAP
SAEAIAAAGV DAIARVGMPG ARARTILELA RAVAGGGLAL HRGGDGEAVR AGLLELSGVG
PWTAEVVAMR ALGEPDAFPA SDLGVLRALG ASSALEAEAR AEAWRPWRSY AVMHLWSRAA
RGGGA