Gene Anae109_3543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3543 
Symbol 
ID5378395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4150219 
End bp4150890 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content77% 
IMG OID640845065 
ProductTetR family transcriptional regulator 
Protein accessionYP_001380708 
Protein GI153006383 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0364286 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCA GCCCCGCACG CTCGCGCAAG CCCGCCGAGG ATCGGCGCCG CGACATCGCC 
GACGCGGCGC TCCGCGTGAT CGCCGACGAC GGGCTCGGTC GCTTCACGGC GCTCGCCATC
GCGCGCCAGG TCGGGGTCTC GGACGCCGCG CTGTTCCGGC ACTTCCCGAA CAAGGAGGCC
ATCGTCCTCG CCGCCATCGA GCGGGTGGAG GAGCTGCTCC TCGACACCTT CCCGCCGCCG
GGCGGCGACC CGCTGCTTCG GCTCGGCACC TTCTTCCGCC GGCGCGTGAG CGTGATCCGC
TCCCGGCCCG GGATCGCGCG CCTCTTCGCC TCGGAGGAGC TGTCCCGCGC CGCGCCGCCC
GAGGGCGTCG CGCGCCTCGC GACGCTGCGC CAGCGCTCCA TGAGCTTCGT CGGGGCGTGC
GTGGCGGAGG CGGCCGCGAG CGGGATCCTC GCCCGCGGCG TCGCCGCCGA AGAGGCGGCG
CTGGTGGTGC TCGGCGCGCT CCTCGCGCTC GCGCACTCCG GCGCGGTCCC GCCCGGCGAC
TCGGGCGATC TGCCCGAGCG CGTCTGGCGG ACCCTGGAGC GCTTCCTCCG CGGGCCTGCC
CGCCCGCGGC ACGTGGCCCG CCGTCCGCCG CGCTCCGAAG GACGGCGAAC CCGTTCCCCC
AAGCAGAGGT GA
 
Protein sequence
MTISPARSRK PAEDRRRDIA DAALRVIADD GLGRFTALAI ARQVGVSDAA LFRHFPNKEA 
IVLAAIERVE ELLLDTFPPP GGDPLLRLGT FFRRRVSVIR SRPGIARLFA SEELSRAAPP
EGVARLATLR QRSMSFVGAC VAEAAASGIL ARGVAAEEAA LVVLGALLAL AHSGAVPPGD
SGDLPERVWR TLERFLRGPA RPRHVARRPP RSEGRRTRSP KQR