Gene Anae109_3523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3523 
Symbol 
ID5376677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4127414 
End bp4128523 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content73% 
IMG OID640845045 
Producthydrogenase (NiFe) small subunit HydA 
Protein accessionYP_001380688 
Protein GI153006363 
COG category[C] Energy production and conversion 
COG ID[COG1740] Ni,Fe-hydrogenase I small subunit 
TIGRFAM ID[TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.584249 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCACC CGACCTCGGT CGCGGGACCC TCTTCGCCGT CACGGCGCGA CTTCATGAAG 
GTCTGCACCA CCGCCGCCGC CGCGGTGGGC CTCCCGGCGT GGGCGGGCGA ACGGATGGCG
GAGGAGGTCG CGAAGGGAAA GAAGCCCTCC GTCATCTGGC TCCACTTCCA GGAGTGCACC
GGGTGCACCG AGTCGCTCCT CCGCACGAGC CACCCCGACG TCGCGGCGCT CATCCTCGAC
CTCGTCTCGC TCGACTACCA CGAGACGCTC CTCGCCGCCG CCGGCTTCCA GGCGGAGGAC
GCGCTCGCGA AGACGATGGA CGAGAACGAC GGCAAGTACG TGTGCGTCAT CGAGGGCGCG
ATCCCGACGC GCGAGGGCGG GCGCTACTGC ATGATCGGGG GCCGCACGGC GCTCGAGATC
GCGCGCACCG TCGCGGGTCG CGCCGGGGCC GTCGCGGCGA TCGGCTCGTG CGCGTCGTGG
GGCGGCGTGC CGTCGGCCGC GCCGAACCCG ACGGGCGCGA CCGGCGCGCC GGAGGTGCTC
GCGGGCAAGA CCGTCGTGAC GCTGCCGGGG TGCCCGGCGA ACCCGTACAA CCTCCTCGGC
ACCGTGCTCC AGTTCGCGAC GTTCGGCACG CTCCCCGCGC TCGACGACAA GGGGCGCCCG
AAGTTCGCCT ACGGCCGCGT CATCCACGAG GACTGCCCGC GCAGGCCGCA CTTCGACGCC
GGCCGGTTCG CCAAGACGTT CGGCGACGAG GGGCACCGGG ACGGCTGGTG CCTCTACAAG
CTCGGCTGCA AGGGACCCCA GACGCACGCC AACTGCTCGC TGCTCCCGTT CTGCGAGGTG
CCCGGCGCCT GGCCCATCGG GATCGGCCAC CCCTGCGTCG GCTGCACCGA GCAGGAGATC
GCGTTCCGCG TCCCGCTCCA CACGACGGTC GAGGTCCAGA AGCCGACCGG GCCGATGGCG
TACCCCGGGA TCGCGCCGGA GCGCGGCGAG GTGAGCGCCG TCTCCGCGGG CGTGGCGGGG
CTCCTCGTCG GCGGTCTCGC CGCCGCGGGC TACGTCTCCT CGCGCAAGCT CGCGCACGAC
GAGCCCAAGG AACCGCCTGG GGAGGGGTAG
 
Protein sequence
MPHPTSVAGP SSPSRRDFMK VCTTAAAAVG LPAWAGERMA EEVAKGKKPS VIWLHFQECT 
GCTESLLRTS HPDVAALILD LVSLDYHETL LAAAGFQAED ALAKTMDEND GKYVCVIEGA
IPTREGGRYC MIGGRTALEI ARTVAGRAGA VAAIGSCASW GGVPSAAPNP TGATGAPEVL
AGKTVVTLPG CPANPYNLLG TVLQFATFGT LPALDDKGRP KFAYGRVIHE DCPRRPHFDA
GRFAKTFGDE GHRDGWCLYK LGCKGPQTHA NCSLLPFCEV PGAWPIGIGH PCVGCTEQEI
AFRVPLHTTV EVQKPTGPMA YPGIAPERGE VSAVSAGVAG LLVGGLAAAG YVSSRKLAHD
EPKEPPGEG