Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_3458 |
Symbol | |
ID | 5377809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 4062251 |
End bp | 4063792 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640844983 |
Product | UDP-N-acetylmuramate |
Protein accession | YP_001380626 |
Protein GI | 153006301 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.00366603 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACGCGGT GGCGGACGGG CTGGGGATCG GGTAGTCCCT CGGCTCGGCG TCCCCCGTCG CGGAGACGGG CGGCCCAGCC CCGAGCCGAG CGGCCGTTCG TTACCAAGGA GAGCAGCGCA GTGATCGACT GGTCCCAGGT GAAGCGCATC CACCTCATCG GCGTCGCGGG CACCGGCATG GGCTCGTTCG CGGGGATGCT CAAGGCCGCC GGCCACACGG TGACGGGCTC CGACGAGAAC GTCTACCCGC CCATGTCCAC CCAGCTCGAG CGCTGGGGCA TCGAGGTGAT GACGCCCTAC CGGGCCGAGA ACCTCGATCG CGCCCGGCCC GACCTCGTCG TCGTCGGCAA CGTCGTCCGG AGCGTGAACC CGGAGGCGAC GGCGATGCGG GAGCGCGGGC TGCCCCACGT CTCGTTCCCG CAGGCCCTCG GCGAGGCGTT CATCGCGCCG AGGCACGGGG TGGTGGTGGT CGGCACGCAC GGGAAGACCA CCACCTCCGC GATGATGGGC TTCCTCCTCC ACCACGCCGG CCGCGATCCT TCGTTCCTCG TCGGCGGCGT CACGCGCGAC TTCGACTCCA ACTACCGGCT CGGGGCAGGC CCGCACTTCG CGGTCGAGGG CGACGAGTAC GACACGGCGT ACTTCGACAA GGGGCCCAAG TTCCTCCACT ACCGCCCGCG CACCGCGATC TTCACGAGCT GCGAGCTCGA CCACGCGGAC ATCTACCGCG ACGAGGCCCA CTACGAGAGC GCGTTCGAGC GGTTCATGGG GATCCTGCCG GAGGACGGCT TCCTCGCCGC CTGCGCGAGC TACGAGAGCG TGCTCCGCAT CGCCCGCGGC GCCCGCTGCC GCGTCGAGAC CTACGCCGTC GACCGCCCGG GCGCGGACTG GGAGGCGCGG GGGCTCGCGC TCTCCCCGGA GGGCGCCCGC TTCACGCTGG CGCGCAGGGG CGAGGCGCTC GCCGAGGTCC TGCTGCCGGT CGGCGGGGCG CACAACGTCG AGAACGCGCT GGGCGTCGCG GCCGCCGCGA GCGCCCTCGG GCTCTCGCCC GCCGAGATCG CCGCCGGGCT GGGCGCGTTC CACGGCGTGA AGCGCCGCCA GGAGGTGCGC GGAAAGGCGG GCGGGGTGAC GGTGATCGAC GACTTCGCCC ATCACCCGCG CGCGGTGCAG AAGACGCTCG CCGCCATCCG TGGCGCGTAC CCCGGCGCGC GGCTCCTCGC CGCCTTCGAG CCGCGCTCCA ACACCAGCCG CCGCAACCTC CACCAGCGCG AGTACGCGGC CGGCGCGACG TGGCGCGACG CGGCGGAGGT GTTCCTGCTC CGCCCCGCCC CCACGGATCG GGTCCCCGAG AGCGAGCGGC TGGACGTGGA CGCGGTGGTC CGCGACGTCA CCGCGGCCGG CACGCCGGCG CGCGCGTTCG CGACGGTGGA GGAGATGGTC CCGGCCATCG CCGCCACGGC GCGCCCGGGA GACGTCGTGG TGGCGATGTC GAACGGGGCG TTTGGCGGCA TCTGGGGAAA GCTGCTGTCC GCCCTTCACT GA
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Protein sequence | MTRWRTGWGS GSPSARRPPS RRRAAQPRAE RPFVTKESSA VIDWSQVKRI HLIGVAGTGM GSFAGMLKAA GHTVTGSDEN VYPPMSTQLE RWGIEVMTPY RAENLDRARP DLVVVGNVVR SVNPEATAMR ERGLPHVSFP QALGEAFIAP RHGVVVVGTH GKTTTSAMMG FLLHHAGRDP SFLVGGVTRD FDSNYRLGAG PHFAVEGDEY DTAYFDKGPK FLHYRPRTAI FTSCELDHAD IYRDEAHYES AFERFMGILP EDGFLAACAS YESVLRIARG ARCRVETYAV DRPGADWEAR GLALSPEGAR FTLARRGEAL AEVLLPVGGA HNVENALGVA AAASALGLSP AEIAAGLGAF HGVKRRQEVR GKAGGVTVID DFAHHPRAVQ KTLAAIRGAY PGARLLAAFE PRSNTSRRNL HQREYAAGAT WRDAAEVFLL RPAPTDRVPE SERLDVDAVV RDVTAAGTPA RAFATVEEMV PAIAATARPG DVVVAMSNGA FGGIWGKLLS ALH
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