Gene Anae109_3458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3458 
Symbol 
ID5377809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp4062251 
End bp4063792 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content74% 
IMG OID640844983 
ProductUDP-N-acetylmuramate 
Protein accessionYP_001380626 
Protein GI153006301 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0773] UDP-N-acetylmuramate-alanine ligase 
TIGRFAM ID[TIGR01081] UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase
[TIGR01082] UDP-N-acetylmuramate--alanine ligase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.00366603 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACGCGGT GGCGGACGGG CTGGGGATCG GGTAGTCCCT CGGCTCGGCG TCCCCCGTCG 
CGGAGACGGG CGGCCCAGCC CCGAGCCGAG CGGCCGTTCG TTACCAAGGA GAGCAGCGCA
GTGATCGACT GGTCCCAGGT GAAGCGCATC CACCTCATCG GCGTCGCGGG CACCGGCATG
GGCTCGTTCG CGGGGATGCT CAAGGCCGCC GGCCACACGG TGACGGGCTC CGACGAGAAC
GTCTACCCGC CCATGTCCAC CCAGCTCGAG CGCTGGGGCA TCGAGGTGAT GACGCCCTAC
CGGGCCGAGA ACCTCGATCG CGCCCGGCCC GACCTCGTCG TCGTCGGCAA CGTCGTCCGG
AGCGTGAACC CGGAGGCGAC GGCGATGCGG GAGCGCGGGC TGCCCCACGT CTCGTTCCCG
CAGGCCCTCG GCGAGGCGTT CATCGCGCCG AGGCACGGGG TGGTGGTGGT CGGCACGCAC
GGGAAGACCA CCACCTCCGC GATGATGGGC TTCCTCCTCC ACCACGCCGG CCGCGATCCT
TCGTTCCTCG TCGGCGGCGT CACGCGCGAC TTCGACTCCA ACTACCGGCT CGGGGCAGGC
CCGCACTTCG CGGTCGAGGG CGACGAGTAC GACACGGCGT ACTTCGACAA GGGGCCCAAG
TTCCTCCACT ACCGCCCGCG CACCGCGATC TTCACGAGCT GCGAGCTCGA CCACGCGGAC
ATCTACCGCG ACGAGGCCCA CTACGAGAGC GCGTTCGAGC GGTTCATGGG GATCCTGCCG
GAGGACGGCT TCCTCGCCGC CTGCGCGAGC TACGAGAGCG TGCTCCGCAT CGCCCGCGGC
GCCCGCTGCC GCGTCGAGAC CTACGCCGTC GACCGCCCGG GCGCGGACTG GGAGGCGCGG
GGGCTCGCGC TCTCCCCGGA GGGCGCCCGC TTCACGCTGG CGCGCAGGGG CGAGGCGCTC
GCCGAGGTCC TGCTGCCGGT CGGCGGGGCG CACAACGTCG AGAACGCGCT GGGCGTCGCG
GCCGCCGCGA GCGCCCTCGG GCTCTCGCCC GCCGAGATCG CCGCCGGGCT GGGCGCGTTC
CACGGCGTGA AGCGCCGCCA GGAGGTGCGC GGAAAGGCGG GCGGGGTGAC GGTGATCGAC
GACTTCGCCC ATCACCCGCG CGCGGTGCAG AAGACGCTCG CCGCCATCCG TGGCGCGTAC
CCCGGCGCGC GGCTCCTCGC CGCCTTCGAG CCGCGCTCCA ACACCAGCCG CCGCAACCTC
CACCAGCGCG AGTACGCGGC CGGCGCGACG TGGCGCGACG CGGCGGAGGT GTTCCTGCTC
CGCCCCGCCC CCACGGATCG GGTCCCCGAG AGCGAGCGGC TGGACGTGGA CGCGGTGGTC
CGCGACGTCA CCGCGGCCGG CACGCCGGCG CGCGCGTTCG CGACGGTGGA GGAGATGGTC
CCGGCCATCG CCGCCACGGC GCGCCCGGGA GACGTCGTGG TGGCGATGTC GAACGGGGCG
TTTGGCGGCA TCTGGGGAAA GCTGCTGTCC GCCCTTCACT GA
 
Protein sequence
MTRWRTGWGS GSPSARRPPS RRRAAQPRAE RPFVTKESSA VIDWSQVKRI HLIGVAGTGM 
GSFAGMLKAA GHTVTGSDEN VYPPMSTQLE RWGIEVMTPY RAENLDRARP DLVVVGNVVR
SVNPEATAMR ERGLPHVSFP QALGEAFIAP RHGVVVVGTH GKTTTSAMMG FLLHHAGRDP
SFLVGGVTRD FDSNYRLGAG PHFAVEGDEY DTAYFDKGPK FLHYRPRTAI FTSCELDHAD
IYRDEAHYES AFERFMGILP EDGFLAACAS YESVLRIARG ARCRVETYAV DRPGADWEAR
GLALSPEGAR FTLARRGEAL AEVLLPVGGA HNVENALGVA AAASALGLSP AEIAAGLGAF
HGVKRRQEVR GKAGGVTVID DFAHHPRAVQ KTLAAIRGAY PGARLLAAFE PRSNTSRRNL
HQREYAAGAT WRDAAEVFLL RPAPTDRVPE SERLDVDAVV RDVTAAGTPA RAFATVEEMV
PAIAATARPG DVVVAMSNGA FGGIWGKLLS ALH