Gene Anae109_3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3399 
Symbol 
ID5375028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp3989731 
End bp3991404 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content75% 
IMG OID640844918 
Productsigma-54 dependent trancsriptional regulator 
Protein accessionYP_001380567 
Protein GI153006242 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain
[COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0150052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTAGGC TCCGCCGCAT GCCCGAGCTC GCCTTCTTCC GCCACGGCGA GGAGCTCCTG 
CGCGTGGCGC TCACCGGCCG GACCGAGATC GGCCGCGCCC CGGAGTGCGA CGTGTCGCTC
CCGGACCCCG CCCTGTCGCG CGTCCACGCG GTGGTCGAGC CGCGCGGCGG CGGGTGGCTC
CTCGTCGATC GATCCGGCCG AGGCGCGCGG ATCGGCGGCG CGGAGGTCCC CGAGGCCGTC
CTGTCGGACG GCGACGAGAT CGCGCTCGGC GCGTGGCGCG CCCTCTTCCG TGCCGCCGCG
GCCCTGCCGC CGGAGGAGAC GCGCGCCCCC GGCCTCACCC GGGTCCGGGA CGGCGGCGCG
GCGGGAGCGG CCCCGGCGCG GCTGCGCGTC CGCGCGGGTG GCCGCGAGCG CACCGTGCCG
GTGACCGCGG CGGGGGTGGT GGTGGGCAAG GACCCGACCT GCGACGCGCC GATCGACGAC
CCGTACGTCT CGGCGCGCCA CCTGCGCATC GAGCCGCGCG GCGGCCTGTG GCACGTCGTC
GATCTCGGCT CCACCAACGG CACGTTCATC TCGGGCGCCC GCGTCTCGCA GGCGCAGCTG
CCCCTGGGCG TCCCGGTCTC GCTGGGCGAC GCCGAGATCG TCCTCGAGCG GCGAGACGCG
CCGGAGCTCG AGCGCCCCGA GGCGTTCGAG GGGATGATCA CGTGCGACTC GGGCATGCGG
CACGTGTTCG AGCTCGTCGA GCGGGTCGCG GCCTCCGACG CCGCGGTGAC CATCCTCGGG
GAGACCGGCA CCGGCAAGGA GCTCGTCGCG CGCGCCTTGC ACGCCCGCTC GGCCCGGCGC
GACGGGCCGT TCATCCCGGT GAACTGCTCC GCCATCGCCG AGACGCTCAT CGAGTCGGAG
CTGTTCGGCC ACGAGAAGGG CGCCTTCTCC GGCGCGGAGC GGATGCGCAA GGGAGCCTTC
GAGGAGGCCG ACCGCGGCAC GATCTTCCTC GACGAGATCG GCGAGCTCCC CCTCGATCTG
CAGCCGAAGC TGCTGCGCGT CCTCGAGCTC GGCGAGGTGA AGCGCGTCGG CGCGTCGCGT
CCGCTCCAGG TGAACGTGCG GATCGTCGCC GCGACGCACC GGGACCTGCG CGCCCAGGTC
CGGGCGGGCC GCTTTCGCGA GGACCTCTTC TACCGGCTCT GCGTCGTCCC CGTCACCGTC
CCGCCGCTCC GCCAGCGGAG GGGCGACGTC CGCGCGCTCG CCGAGACGTT CCTCGCCCGC
GCAGCGCCGC GCGGGCTCCC CCTGCGCTGG GCCCCCGAGG CGCTCGCCAA GCTCGAGGGC
TACGACTGGC CCGGGAACGT CCGCCAGCTG AGGAACGTGG TGCAGCGCGC CCTCCTGTTC
CGCGGAGAGG GGCAGTGCGT CTCCGCCGAC GCCGTGACGT TCGAGGACAC GCGCGCCGCG
CCGGGCCCGG GCGGCGACGA TGACACCCTG TACCTGCCCG GTCTCACGCT GGAGGACATC
GAGCGGGAGG CGATCCGGCT CTCGCTGCGC CGGAACAAGG GCAAGCGGGC GGCGGTGGTG
AAGGAGCTCC ACATCGCGAA GAGCACGGTG CTGAAGCGGA TCGGCCAGTG GGGGCTGCAC
CACGAGGGAC GCGCGGCGGG AGAAGCAGGA GAAGGGGAGG ATGACGGGGA GTAA
 
Protein sequence
MARLRRMPEL AFFRHGEELL RVALTGRTEI GRAPECDVSL PDPALSRVHA VVEPRGGGWL 
LVDRSGRGAR IGGAEVPEAV LSDGDEIALG AWRALFRAAA ALPPEETRAP GLTRVRDGGA
AGAAPARLRV RAGGRERTVP VTAAGVVVGK DPTCDAPIDD PYVSARHLRI EPRGGLWHVV
DLGSTNGTFI SGARVSQAQL PLGVPVSLGD AEIVLERRDA PELERPEAFE GMITCDSGMR
HVFELVERVA ASDAAVTILG ETGTGKELVA RALHARSARR DGPFIPVNCS AIAETLIESE
LFGHEKGAFS GAERMRKGAF EEADRGTIFL DEIGELPLDL QPKLLRVLEL GEVKRVGASR
PLQVNVRIVA ATHRDLRAQV RAGRFREDLF YRLCVVPVTV PPLRQRRGDV RALAETFLAR
AAPRGLPLRW APEALAKLEG YDWPGNVRQL RNVVQRALLF RGEGQCVSAD AVTFEDTRAA
PGPGGDDDTL YLPGLTLEDI EREAIRLSLR RNKGKRAAVV KELHIAKSTV LKRIGQWGLH
HEGRAAGEAG EGEDDGE