Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_3399 |
Symbol | |
ID | 5375028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 3989731 |
End bp | 3991404 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 640844918 |
Product | sigma-54 dependent trancsriptional regulator |
Protein accession | YP_001380567 |
Protein GI | 153006242 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1716] FOG: FHA domain [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0150052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCTAGGC TCCGCCGCAT GCCCGAGCTC GCCTTCTTCC GCCACGGCGA GGAGCTCCTG CGCGTGGCGC TCACCGGCCG GACCGAGATC GGCCGCGCCC CGGAGTGCGA CGTGTCGCTC CCGGACCCCG CCCTGTCGCG CGTCCACGCG GTGGTCGAGC CGCGCGGCGG CGGGTGGCTC CTCGTCGATC GATCCGGCCG AGGCGCGCGG ATCGGCGGCG CGGAGGTCCC CGAGGCCGTC CTGTCGGACG GCGACGAGAT CGCGCTCGGC GCGTGGCGCG CCCTCTTCCG TGCCGCCGCG GCCCTGCCGC CGGAGGAGAC GCGCGCCCCC GGCCTCACCC GGGTCCGGGA CGGCGGCGCG GCGGGAGCGG CCCCGGCGCG GCTGCGCGTC CGCGCGGGTG GCCGCGAGCG CACCGTGCCG GTGACCGCGG CGGGGGTGGT GGTGGGCAAG GACCCGACCT GCGACGCGCC GATCGACGAC CCGTACGTCT CGGCGCGCCA CCTGCGCATC GAGCCGCGCG GCGGCCTGTG GCACGTCGTC GATCTCGGCT CCACCAACGG CACGTTCATC TCGGGCGCCC GCGTCTCGCA GGCGCAGCTG CCCCTGGGCG TCCCGGTCTC GCTGGGCGAC GCCGAGATCG TCCTCGAGCG GCGAGACGCG CCGGAGCTCG AGCGCCCCGA GGCGTTCGAG GGGATGATCA CGTGCGACTC GGGCATGCGG CACGTGTTCG AGCTCGTCGA GCGGGTCGCG GCCTCCGACG CCGCGGTGAC CATCCTCGGG GAGACCGGCA CCGGCAAGGA GCTCGTCGCG CGCGCCTTGC ACGCCCGCTC GGCCCGGCGC GACGGGCCGT TCATCCCGGT GAACTGCTCC GCCATCGCCG AGACGCTCAT CGAGTCGGAG CTGTTCGGCC ACGAGAAGGG CGCCTTCTCC GGCGCGGAGC GGATGCGCAA GGGAGCCTTC GAGGAGGCCG ACCGCGGCAC GATCTTCCTC GACGAGATCG GCGAGCTCCC CCTCGATCTG CAGCCGAAGC TGCTGCGCGT CCTCGAGCTC GGCGAGGTGA AGCGCGTCGG CGCGTCGCGT CCGCTCCAGG TGAACGTGCG GATCGTCGCC GCGACGCACC GGGACCTGCG CGCCCAGGTC CGGGCGGGCC GCTTTCGCGA GGACCTCTTC TACCGGCTCT GCGTCGTCCC CGTCACCGTC CCGCCGCTCC GCCAGCGGAG GGGCGACGTC CGCGCGCTCG CCGAGACGTT CCTCGCCCGC GCAGCGCCGC GCGGGCTCCC CCTGCGCTGG GCCCCCGAGG CGCTCGCCAA GCTCGAGGGC TACGACTGGC CCGGGAACGT CCGCCAGCTG AGGAACGTGG TGCAGCGCGC CCTCCTGTTC CGCGGAGAGG GGCAGTGCGT CTCCGCCGAC GCCGTGACGT TCGAGGACAC GCGCGCCGCG CCGGGCCCGG GCGGCGACGA TGACACCCTG TACCTGCCCG GTCTCACGCT GGAGGACATC GAGCGGGAGG CGATCCGGCT CTCGCTGCGC CGGAACAAGG GCAAGCGGGC GGCGGTGGTG AAGGAGCTCC ACATCGCGAA GAGCACGGTG CTGAAGCGGA TCGGCCAGTG GGGGCTGCAC CACGAGGGAC GCGCGGCGGG AGAAGCAGGA GAAGGGGAGG ATGACGGGGA GTAA
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Protein sequence | MARLRRMPEL AFFRHGEELL RVALTGRTEI GRAPECDVSL PDPALSRVHA VVEPRGGGWL LVDRSGRGAR IGGAEVPEAV LSDGDEIALG AWRALFRAAA ALPPEETRAP GLTRVRDGGA AGAAPARLRV RAGGRERTVP VTAAGVVVGK DPTCDAPIDD PYVSARHLRI EPRGGLWHVV DLGSTNGTFI SGARVSQAQL PLGVPVSLGD AEIVLERRDA PELERPEAFE GMITCDSGMR HVFELVERVA ASDAAVTILG ETGTGKELVA RALHARSARR DGPFIPVNCS AIAETLIESE LFGHEKGAFS GAERMRKGAF EEADRGTIFL DEIGELPLDL QPKLLRVLEL GEVKRVGASR PLQVNVRIVA ATHRDLRAQV RAGRFREDLF YRLCVVPVTV PPLRQRRGDV RALAETFLAR AAPRGLPLRW APEALAKLEG YDWPGNVRQL RNVVQRALLF RGEGQCVSAD AVTFEDTRAA PGPGGDDDTL YLPGLTLEDI EREAIRLSLR RNKGKRAAVV KELHIAKSTV LKRIGQWGLH HEGRAAGEAG EGEDDGE
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