Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_3359 |
Symbol | |
ID | 5374344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 3925845 |
End bp | 3927869 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640844873 |
Product | NifA subfamily transcriptional regulator |
Protein accession | YP_001380527 |
Protein GI | 153006202 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAG TAGCTACCCG GTATGACGAG CGCGGCATCA CCATGGACAC CCCTCCCTCT CTACGGACGC CCGGGCAGCA GGCGATGACG GACGAGGGCT GGCACCAGCT CTTCGAGCAC TCGGCCATCG GGGTGACGCT CGCCGATCTC GAAGGGCACC TCGTCCACGT GAACCGCGCC TACTGCGCGA TGCTCGGCTA CACGGAGGTC GAGCTCGAGG GGCACTCGTA CGTCTCCCAT GCACACCCGG ATGATCGCGC GCGCCACCTG ATTCTCGTTC GCGAGCTGCT CGCCGATGCC CGCGCCCATT TCCAGGTCGA GGAGCGGTAC GTCCGCAAGG GCGGCTCGGT GATGTGGGTC AGCAACAGCG TGTCGCTGGT GCCGCCCCGG GGCGGCTCGC GCCGGATCCT CATCCTCGGG CTCGTCGAGG ACATCACCGA GCGCATGCGC CTCCGTGACG AGCTGGACGC CGAGCGGAAC CGGCTACGCC TTCTGCTCGA CGTCAACGAG CTCCTGGTCG CGCACCTCGA CCTTCGGGAG ATGTTCCAGG CGCTCGCGTC GAGCCTGCGG AGGGTCACGG ATTGCCACTT CATCGGTCTC GCCCTGCCCG ACGCCGCGAC GGGCGAGCTG CGGCAGCACA TCGTCGACCA TCCGGACGGG AAGGGTGCCA TCACCGAGGG CATGGTGCTG CCTCTTCACG GCTCCGCCTC CGGCAAGGCG TTTCGCACGG GCGCGCCCGT CTTGTTGAAC GACCCGGAGG CGAACCGCCA GGACCCGGAC CTGTATGGCA CTCCCGAGGG AGCGCGGTTC TATCGGACCG TGCTCGAGGA AGGAGTTCCT TCGGGATACG TCCTGCCGCT CGTTCACCGT GGCGAGGTGC TGGGCGTCCT CCAGCTCAAG AAGTACGCGG ACGCTCGATT CAAGGAACGA GAGATCGAGT TCATGTCCAA GGTGGCGGGC CAGCTCTCGA TCGCGGTGGC GAACGCCCTC GAGTACCGCG AGGTCAAGGA GTCGAAGGAG CGGCTGGACA GGGAGCGGGT CTACCTGAAG GAGGAGATCC GGTCTGCGCA CGACTTCGAG GAGATCATCG GGGTGAGCCG CACGCTGAAG CAGGTGCTCG GCCAGATCGA CACGGTCGCG GTCACGGACT CGACCGTCCT CATCCTGGGG GAGACCGGCA CGGGCAAGGA GCTGATCGCG CGCGCCATTC ACAACCGCAG CCGGCGGCGT GACCGTCCAT TCGTGAAGGT CAACTGCTCC GCGATCCCCA CCGGGCTCCT CGAGAGCGAG CTCTTCGGCC ACGAGCGCGG CGCCTTCACC GGGGCCACCG CGCCCAGGAT CGGACGCTTC GAGGCGGCCG ACCAGGGGAC GCTGTTCCTC GACGAGATCG GGGACCTCCC CGTGGACCTG CAGCCCAAGC TGCTCCGGGT CCTCCAGGAG CGCGAGTTCG AGCGGTTGGG CGCCAGCCGC ACGCGACGGG TCGACGTCCG GGTCGTCGCG GCGACGAACC GGGGACTCGC CACGATGGTC GGGGAGGGCA GGTTCCGGGA GGATCTGTAC TACCGGCTGA ATGTCTTCCC CATCACGCTT CCACCGCTGC GGGAGCGCGC CGGGGACATC CCGCTCCTCG TGCGGCACTT CGTCGGCGTC TACGCCCGGC GGATGGGCAA GCAGATCGAC CACATCCCCG ACGCGTCCAT GCGCGCGCTG GTCGGCTATC ACTGGCCGGG CAACGTACGC GAGCTGCAGA ACGTGATCGA GCGGGCGGTG ATCCTCACCC CCGGTGCGGT CCTCGAGCTG GCGCTCGCCG AAAGGGCCGC CGGCGCCCGG GAAGATCGAC CGGACGCCGC GGCACCCAAC GGCCACCGCA CGCTGCAGGA GGTGGAGCGT GAGCACATCC TGGGCGCGCT CCAGGAGGCC AAGTGGGTGA TCGGCGGCCC GAACGGCGCG GCCGCGCGTC TCGGCCTACG GCGCACCTCG CTCATGTACC GGATGGAGAA GCTGGGCATC GCTCGACCGA CGTGA
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Protein sequence | MTEVATRYDE RGITMDTPPS LRTPGQQAMT DEGWHQLFEH SAIGVTLADL EGHLVHVNRA YCAMLGYTEV ELEGHSYVSH AHPDDRARHL ILVRELLADA RAHFQVEERY VRKGGSVMWV SNSVSLVPPR GGSRRILILG LVEDITERMR LRDELDAERN RLRLLLDVNE LLVAHLDLRE MFQALASSLR RVTDCHFIGL ALPDAATGEL RQHIVDHPDG KGAITEGMVL PLHGSASGKA FRTGAPVLLN DPEANRQDPD LYGTPEGARF YRTVLEEGVP SGYVLPLVHR GEVLGVLQLK KYADARFKER EIEFMSKVAG QLSIAVANAL EYREVKESKE RLDRERVYLK EEIRSAHDFE EIIGVSRTLK QVLGQIDTVA VTDSTVLILG ETGTGKELIA RAIHNRSRRR DRPFVKVNCS AIPTGLLESE LFGHERGAFT GATAPRIGRF EAADQGTLFL DEIGDLPVDL QPKLLRVLQE REFERLGASR TRRVDVRVVA ATNRGLATMV GEGRFREDLY YRLNVFPITL PPLRERAGDI PLLVRHFVGV YARRMGKQID HIPDASMRAL VGYHWPGNVR ELQNVIERAV ILTPGAVLEL ALAERAAGAR EDRPDAAAPN GHRTLQEVER EHILGALQEA KWVIGGPNGA AARLGLRRTS LMYRMEKLGI ARPT
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