Gene Anae109_3278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3278 
Symbol 
ID5377457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp3830422 
End bp3831252 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content72% 
IMG OID640844796 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001380452 
Protein GI153006127 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCTGT CGCGTGAGCG TGCGCGCCTC CCCTTCGCGG GCAAGGTGGC GATGGTCGCG 
GGCGCGAGCC GTGGAATCGG CGCCGCCACG GCCCGCGCGT TCGCGGCAGC GGGGGCCGCG
GTTGCGCTGG CCGCCCGGGA CGGAGCAGCG CTCAATGGCG TGGTGGAGAG CATTCGCGCG
GAGGGCGGCG ACGCCATGGC CATCCCGACC GACGTGGGGG ACGCCGGAGC TGTCGCTCAC
CTCGTCGCCG AGACGACCCG GGTGTTCGGG CGCCTCGACG CCGCGTTCAA CAACGCGACG
GACGGCCCTC CGCCCGCGCC GCTCGCAGAC CTCGACCCGG ACGACTTCGA CCGCGGCATC
CGCGCGGACG TACGCGGCAC CTTTCTGGGC ATGAAGTACG AGATACCGGC CATGTTGCGG
TCGGGCGGCG GCGCCATCGT GAACATGGCC TCGCTGGCTG CCCTGTACGG GTTCACGGGG
CTCGGCGCCT ACGTGGCGGG TAAGTCCGGA ATCATCGGCC TCACCCGCGT CGCTGCGCTC
GACTATGCGG ATCGAGGGAT TCGCGTGAAC GTCGTGGCGC CCGGGCCCAT CCTGACTCAT
CACCTCGAGC GCGCCGGGGA GGAGGCGCAA CGGCAAGCCG CTTCCGCCAC GCCGATGGGG
CGCATAGGGC GGGTCGAGGA AGTCGCCGCC GCCGTCCTGT GGCTCTGCTC CGAGCAGGCG
TCGTTCATCA CCGGCGTGAC CCTCCCCATC GACGGCGGCC AGTCCGCTGG TCTGAAGCCC
TCGCGCGTGT ATCGGGCAGG AGAACCGATG GAGAAGAAGC AGGTGCCGTG A
 
Protein sequence
MTLSRERARL PFAGKVAMVA GASRGIGAAT ARAFAAAGAA VALAARDGAA LNGVVESIRA 
EGGDAMAIPT DVGDAGAVAH LVAETTRVFG RLDAAFNNAT DGPPPAPLAD LDPDDFDRGI
RADVRGTFLG MKYEIPAMLR SGGGAIVNMA SLAALYGFTG LGAYVAGKSG IIGLTRVAAL
DYADRGIRVN VVAPGPILTH HLERAGEEAQ RQAASATPMG RIGRVEEVAA AVLWLCSEQA
SFITGVTLPI DGGQSAGLKP SRVYRAGEPM EKKQVP