Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_3121 |
Symbol | |
ID | 5374142 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | + |
Start bp | 3652684 |
End bp | 3654180 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640844645 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001380301 |
Protein GI | 153005976 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 58 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCGCA GGAACCCCCA GGCGTCGGTC TCGGAGATGG CCAGGGCGAG GAAGCGCGAG GAGTTTCTCG CCAGGATCCG TCAGGCGTCG CGGGTGGACG TCTCGGCGCA GAGCGCCCGT CCGAGCGGCA AGGGACGAGA GGCCGAGCGG GCCGAGAAGC GGCCGCCCGC CCGTCACCAG ACCGTGGCCG TCGCGCCCGC CCCCGCGCCG GAGCGCGTGC CGGCTCGCGC CGAGCGCCCT CGGCCAGCGC CGGTCCGGGT CGAGCCCTCG CAGCCGGAGC GCGCGGAGCG GCCCCACGCA GCCCCCAGGC TGTTCCGCGA GGAGGCGCTC AAGCACCGCC TCGCCTTCGA GGAGGGGCGT GGCCTCGTCC GCGTGTCTCC CCCGTGGACG TGGGCGCTCC TCTGGGTCGT GGTGTCGGGC CTCTGCGCGG CGATCGCGAC GTCGTTCGTC GGCAAGGTGG AGGTCACCGG GCGCGGGCGC GGCATCCTCC GGCCGGCCAC GGGCGTCCGC GTCCTGACGA GCCAGCTCGG CGGGACCGTC GTTCGCGTCG AGGCGCGCTC CGGCGAACGG GTGAAGGCTG GCACCTCGCT CCTCCGGATC GAGTCGCCGA CCGTGCAGGC GCAGCTCCTC GAGGCGGACC GAGAGCTCGA GGCCCTGCGC ACCCAGTACT CCGCCGTCTC CTCCCAGCAG GACGAGCACT ACGGCGAGCA GCTCGCGAAC CTGAAGGCCC GGGCGAAGCG CGTGGAAGAG CAGATCGCGA GCCTGCGGAG CTCCGCGCAG CACTACGAGC GCCGCGTCCA GGCCGACGTC GGCCTCCTGC AGCGGGGCCT CGTGAGCGAG CTGGCGGTGA GCGAGACCCG GGACTCCCTC GCGCAGGCCC AGCGCCAGCT GAGCGCCGCC GATCAGACCC TCGATCAGAC GCGGCAGGAG CTCGCCTCGC TCGAGTCCCG GCGCGAGGAC GAGCTCTGGA ACCGCCAGGA GCGCCTCGCG GCGGCGCAGA ACAAGCGCGA CGCGCTCGCC GTGGTCCTCC GGCAGGCGGT GATCGAGGCG CCGCAGGACG GGACCGTCGA GGCGCTGCTG GTGAAGGAGG GCGAGGTGGT CCAGGCCGGC CAGCCCCTCG GGAAGCTCGT CCCGGTCGAT TCCCCGCTCC AGGTCGTGTC CTTCCTCGCC GAGCGGGATC GCGCCTTCGC GAAGCCCGGC GACGAGGTTC AGCTGGAGCT CGATCAGCTG CCGCACGCCC AGTACGGCAC GCTGCGGGCG AGGGTGCTGC GCATCGGCGA CGACCTCGCC TCGCCCTCCG AGATCCACGA CGCGCTCGGC GACCAGAAGC TCGAGGCGCC GAGCTACCGG GTCGAGCTCG AGATCACCGA TGCGCGCGCG GCGGAGTCCG CGCACGTGAA GCTCCGCACG GGCACCCTCA TGAACGTTCG CTTCACGCTC CGGACCGAGC GGCTCATCAC GCTCGTCCTC AACCCGCTGC GGCGATGGTT CCGGTGA
|
Protein sequence | MTRRNPQASV SEMARARKRE EFLARIRQAS RVDVSAQSAR PSGKGREAER AEKRPPARHQ TVAVAPAPAP ERVPARAERP RPAPVRVEPS QPERAERPHA APRLFREEAL KHRLAFEEGR GLVRVSPPWT WALLWVVVSG LCAAIATSFV GKVEVTGRGR GILRPATGVR VLTSQLGGTV VRVEARSGER VKAGTSLLRI ESPTVQAQLL EADRELEALR TQYSAVSSQQ DEHYGEQLAN LKARAKRVEE QIASLRSSAQ HYERRVQADV GLLQRGLVSE LAVSETRDSL AQAQRQLSAA DQTLDQTRQE LASLESRRED ELWNRQERLA AAQNKRDALA VVLRQAVIEA PQDGTVEALL VKEGEVVQAG QPLGKLVPVD SPLQVVSFLA ERDRAFAKPG DEVQLELDQL PHAQYGTLRA RVLRIGDDLA SPSEIHDALG DQKLEAPSYR VELEITDARA AESAHVKLRT GTLMNVRFTL RTERLITLVL NPLRRWFR
|
| |