Gene Anae109_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3117 
Symbol 
ID5375947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp3650191 
End bp3650784 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content72% 
IMG OID640844641 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001380297 
Protein GI153005972 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGAACC AGAACAGCGC GGCAGCGTCC GTTCAGCAGT CGGTCCAGCA GCTCGTCGAC 
GCCGGCGACG TGTCGGCCGC CGCCACCGCG GCGCTGCGCG CGCTCGGCCC GGAGATCCTG
CGCTTCCTGC GCTCGGTCCT GCGCGACGAG GAGGACGCCG CGGACGCGTT CTCGCACTTC
GCGGAGCGCC TCTGGCGCGG GCTCTCGAGC TTCGAGGGTC GCTCCTCCCT GCGCACGTGG
GCGTTCCGCA TCGCCTGGAA CTCCGCGCTC AGCATCCGCA ACGACGCGTG GCACCGGCGC
GGGCGGCGGT TCGCGACCGG CGAGGCCTCC GCGCTCGCCG AGGAGATCCG CACGAAGACC
GTGGTGCGCG TCGAGCGCCG GCGGGACGCG TTCGAGAAGC TGCGGCGGGC GCTCTCGGCG
GAGGATCAGT CACTGCTGGC GCTGCGCCTC GACCGCGGCT TCTCCTGGGA GGAGGTCGCC
GAGATCATGT CGGCCGGAGG CGAGCCCGTC CAGGCGCTCA CGCTCATGAA GCGCTTCGAG
CGGATCAAGA AGCGCCTCGC GGAGATGGTC AAGAAGCAGG CGCTGGACGA GTAG
 
Protein sequence
MENQNSAAAS VQQSVQQLVD AGDVSAAATA ALRALGPEIL RFLRSVLRDE EDAADAFSHF 
AERLWRGLSS FEGRSSLRTW AFRIAWNSAL SIRNDAWHRR GRRFATGEAS ALAEEIRTKT
VVRVERRRDA FEKLRRALSA EDQSLLALRL DRGFSWEEVA EIMSAGGEPV QALTLMKRFE
RIKKRLAEMV KKQALDE