| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_3115 |
|---|
| Symbol | |
|---|
| ID | 5375945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 3647944 |
|---|
| End bp | 3648870 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640844639 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001380295 |
|---|
| Protein GI | 153005970 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.479676 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGTC ACCCCGGTGC GGTTCGAGCG CCCGCAGGAT CGGGCGGCGT GGCGATCTGG
ACGCGGCGCG GCATGGTCGC GCTCGCGGTG CTCCTCGGCG CGTGCTGGTA CCCGAAGGAG
CGGGGAGCGC GGCTGGAGCA GCGCGTCGAG CGGATCGAGG GCGAGGCGCC GGCCGTGCAG
CCCGGCGCCG ACGCCGAGGC GGCGCGGGAG CAGGCGCGTC GCGTGGACGC GACGCTCGCG
CAGGTGAACA CGAGGCTCGA GGCGCTGGAC CGCGCCACCC GAGCCGGAGC CCCGCCGCCG
GAGGGTCAGG CCGAGCTGGT GAAGGAGCTC AGGCAGCTGC GCGCGACGCT CGAGCAGCAC
GGGCAGCGGC TCGACGCGGT CGAGAGGTCG CTCGCCCAGG GCCAGCAGCG CAGCGGCGCC
GCGCGCGTCG CGGAGAGCCG GCCCTCGGCG TCGAAGACCT CGTCGAAGCC GTCGGCGGCG
GCTCCCGCCC CTGGCCCCGC GCCGGGCCCC GCCCTCTCCG CGAACGAGAC GGACGTCCTC
GCCCTCGCGC GCGCGCAGGA GCAGCAGGGC AACAAGACCG TGGCCCGTGA GCTCTACGAG
CAGTACGTCG CCCAGTTCCC GGCGGACCCC GCCAGCGCCG AGGCGCACTT CCGGCTCGGC
GAGCTGGCGT TCGGCGAGCG CCGCTACCGG GACGCCGTCC TCGAGTTCGG AAAGGTGGCG
CGCGAGTTCC CGCGCTCCGG CAAGGCGCCT GACGCGCTGG TGCGAACCGG CGAGGCGATG
CTGCAGCTCG ACATGAGAGA GGAGGCGAAG ACCGTCCTGT CCGAGGTCCC GCAGCGGTAC
CCCGGGACCC CCGCCGCCGC GCGCGCCCGC TCGCTGCTCG CCGAGACCCC GAACGCGAGC
ACCGCGGCGG GGAAGAAGCG AGAGTGA
|
|---|
| Protein sequence | MSGHPGAVRA PAGSGGVAIW TRRGMVALAV LLGACWYPKE RGARLEQRVE RIEGEAPAVQ
PGADAEAARE QARRVDATLA QVNTRLEALD RATRAGAPPP EGQAELVKEL RQLRATLEQH
GQRLDAVERS LAQGQQRSGA ARVAESRPSA SKTSSKPSAA APAPGPAPGP ALSANETDVL
ALARAQEQQG NKTVARELYE QYVAQFPADP ASAEAHFRLG ELAFGERRYR DAVLEFGKVA
REFPRSGKAP DALVRTGEAM LQLDMREEAK TVLSEVPQRY PGTPAAARAR SLLAETPNAS
TAAGKKRE
|
|---|
| |