Gene Anae109_3076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3076 
Symbol 
ID5374463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp3596262 
End bp3597884 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content74% 
IMG OID640844600 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001380256 
Protein GI153005931 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2303] Choline dehydrogenase and related flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00183108 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.66494 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCAGCG CGCTCGACTA CGACTTCATC GTCATCGGCT CCGGCTTCGG CGGGGCGGTC 
TCCGCCCTGC GGCTCTCCGA GAAGGGCTAT CGCGTCGCGG TGCTGGAGAT GGGGAAGCGC
TGGGGGCAAG ACGACTTCGC CGCGACGAAC TGGAACCTGC GCAAGTCGCT GTGGATGCCG
AGGCTGCTCT GCTACGGGAT CCAGCAGATC TCCGTCCTGA AGCACGTGCT CGTCCTGCAC
GGCGCGGGCG TCGGCGGCGG CAGCCTCGTC TACGCGAACA CGCTCCTCGT CCCGGCGGCG
CGCGCGTTCC GGGATCCGCG CTGGCCCGGG AGCGAGGACT GGAGCGAGAA GCTCGCCCCG
CACTACGCGA CCGCCCGGTT CATGCTGGGC GCGAGGCCCG CGCGGGAGAC CTTCCCCGCG
GACGAGCTGC TCCGCGAGGC CGTGGAGGAG GAGACCGGAC GCGGGAGCAC GTTCGCGCGC
CACACGGTCG GCGTGTACTA CGGCGGCGAG GCGGGGCGCA CCGATCCCGA TCCGTACTTC
GGCGGCGAGG GCCCCGCGCG CACTGGCTGC ACCCTGTGCG GCGGCTGCAT GACGGGGTGC
AGGCACGGCG CGAAGAACAC ACTCGACCGG AACTACCTCT TCCTCGCCGA GCGGCGCGGG
TGCGTCATCC ACGCCGAGAC CAAGGTCACC GACGTCCGGC CGATGCCGGA GGGCGGCTAC
GAGGTGCGCA CCGTCCGCTC CACGCGCCCG CTCTCCGTGG GCTCGCGCGT GCTCCGAGCG
CGCGGGGTCG TGCTCTCCGC CGGCGCGCTC GGGACCGTGA GCCTGCTCCT GGGATGCAAG
GAGCGCGGCA GCCTCGCGCG CCTGAGCGAC CGGCTCGGCG ACTACGTGCG CACGAACAGC
GAGGCGCTGC TCGCCGTCAC CGCGCGGCGC GGCGACGTCG ACTACAGCCG CGGGATCGCC
ATCACCTCCG GCGTGGACGC GGACGACGAC ACCCACGTCG AGATCGTCCG CTACGGCGCC
GGCCACGACG CCATGGCCCT GCTCTCGACG CACCTCACCG GCCACGGCCC GCCCTGGCCG
CGCTGGCTGC GCTGGATCGG CAACGCGTTC CGCCACCCGC TCGACTTCCT GCGCGCGCAC
TGGCCGTTCG GCTGGGCGCG TCGCACCGCC GTGCTGCTCG TCATGCAGCC GCTCTCGAGC
CACATGCGCC TGCGGCTCGC GCGGCGTCCG TGGGGGAGGG CGCTCACCAC GGCGCTCTCG
GACGGGCAGC GGCCGCCGAC GTACATGCCC CTCGCGAACG CGCTCGCCCG GCGGCTGGCG
CGCAAGATGG ACGGCGTGCC GCAGAGCGGG TTGCACGAGG TGCTCCTCGG CGCCTCCAGC
ACCGCCCACA TCCTGGGCGG CGCGACCATG GGCGCCTCGC CGGCGGAGGG CGTCTGCGAC
AGCGGGGGGC GGGTCTTCGG CTACGAGCAC CTCTACGTCG CGGACGGCAG CCTCGTCCCG
GCGAACCTGG GCGTGAACCC GTCGCTCACC ATCACCGCCC TCGCCGAGCA CGTGATGAGC
GGGATCCCGG CGAACCCCGA GGGCACGCCG AAGCCGGCGC CGCGACCGCC GTCGGGCGGG
TGA
 
Protein sequence
MPSALDYDFI VIGSGFGGAV SALRLSEKGY RVAVLEMGKR WGQDDFAATN WNLRKSLWMP 
RLLCYGIQQI SVLKHVLVLH GAGVGGGSLV YANTLLVPAA RAFRDPRWPG SEDWSEKLAP
HYATARFMLG ARPARETFPA DELLREAVEE ETGRGSTFAR HTVGVYYGGE AGRTDPDPYF
GGEGPARTGC TLCGGCMTGC RHGAKNTLDR NYLFLAERRG CVIHAETKVT DVRPMPEGGY
EVRTVRSTRP LSVGSRVLRA RGVVLSAGAL GTVSLLLGCK ERGSLARLSD RLGDYVRTNS
EALLAVTARR GDVDYSRGIA ITSGVDADDD THVEIVRYGA GHDAMALLST HLTGHGPPWP
RWLRWIGNAF RHPLDFLRAH WPFGWARRTA VLLVMQPLSS HMRLRLARRP WGRALTTALS
DGQRPPTYMP LANALARRLA RKMDGVPQSG LHEVLLGASS TAHILGGATM GASPAEGVCD
SGGRVFGYEH LYVADGSLVP ANLGVNPSLT ITALAEHVMS GIPANPEGTP KPAPRPPSGG