| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_3076 |
|---|
| Symbol | |
|---|
| ID | 5374463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 3596262 |
|---|
| End bp | 3597884 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640844600 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001380256 |
|---|
| Protein GI | 153005931 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00183108 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 0.66494 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCAGCG CGCTCGACTA CGACTTCATC GTCATCGGCT CCGGCTTCGG CGGGGCGGTC
TCCGCCCTGC GGCTCTCCGA GAAGGGCTAT CGCGTCGCGG TGCTGGAGAT GGGGAAGCGC
TGGGGGCAAG ACGACTTCGC CGCGACGAAC TGGAACCTGC GCAAGTCGCT GTGGATGCCG
AGGCTGCTCT GCTACGGGAT CCAGCAGATC TCCGTCCTGA AGCACGTGCT CGTCCTGCAC
GGCGCGGGCG TCGGCGGCGG CAGCCTCGTC TACGCGAACA CGCTCCTCGT CCCGGCGGCG
CGCGCGTTCC GGGATCCGCG CTGGCCCGGG AGCGAGGACT GGAGCGAGAA GCTCGCCCCG
CACTACGCGA CCGCCCGGTT CATGCTGGGC GCGAGGCCCG CGCGGGAGAC CTTCCCCGCG
GACGAGCTGC TCCGCGAGGC CGTGGAGGAG GAGACCGGAC GCGGGAGCAC GTTCGCGCGC
CACACGGTCG GCGTGTACTA CGGCGGCGAG GCGGGGCGCA CCGATCCCGA TCCGTACTTC
GGCGGCGAGG GCCCCGCGCG CACTGGCTGC ACCCTGTGCG GCGGCTGCAT GACGGGGTGC
AGGCACGGCG CGAAGAACAC ACTCGACCGG AACTACCTCT TCCTCGCCGA GCGGCGCGGG
TGCGTCATCC ACGCCGAGAC CAAGGTCACC GACGTCCGGC CGATGCCGGA GGGCGGCTAC
GAGGTGCGCA CCGTCCGCTC CACGCGCCCG CTCTCCGTGG GCTCGCGCGT GCTCCGAGCG
CGCGGGGTCG TGCTCTCCGC CGGCGCGCTC GGGACCGTGA GCCTGCTCCT GGGATGCAAG
GAGCGCGGCA GCCTCGCGCG CCTGAGCGAC CGGCTCGGCG ACTACGTGCG CACGAACAGC
GAGGCGCTGC TCGCCGTCAC CGCGCGGCGC GGCGACGTCG ACTACAGCCG CGGGATCGCC
ATCACCTCCG GCGTGGACGC GGACGACGAC ACCCACGTCG AGATCGTCCG CTACGGCGCC
GGCCACGACG CCATGGCCCT GCTCTCGACG CACCTCACCG GCCACGGCCC GCCCTGGCCG
CGCTGGCTGC GCTGGATCGG CAACGCGTTC CGCCACCCGC TCGACTTCCT GCGCGCGCAC
TGGCCGTTCG GCTGGGCGCG TCGCACCGCC GTGCTGCTCG TCATGCAGCC GCTCTCGAGC
CACATGCGCC TGCGGCTCGC GCGGCGTCCG TGGGGGAGGG CGCTCACCAC GGCGCTCTCG
GACGGGCAGC GGCCGCCGAC GTACATGCCC CTCGCGAACG CGCTCGCCCG GCGGCTGGCG
CGCAAGATGG ACGGCGTGCC GCAGAGCGGG TTGCACGAGG TGCTCCTCGG CGCCTCCAGC
ACCGCCCACA TCCTGGGCGG CGCGACCATG GGCGCCTCGC CGGCGGAGGG CGTCTGCGAC
AGCGGGGGGC GGGTCTTCGG CTACGAGCAC CTCTACGTCG CGGACGGCAG CCTCGTCCCG
GCGAACCTGG GCGTGAACCC GTCGCTCACC ATCACCGCCC TCGCCGAGCA CGTGATGAGC
GGGATCCCGG CGAACCCCGA GGGCACGCCG AAGCCGGCGC CGCGACCGCC GTCGGGCGGG
TGA
|
|---|
| Protein sequence | MPSALDYDFI VIGSGFGGAV SALRLSEKGY RVAVLEMGKR WGQDDFAATN WNLRKSLWMP
RLLCYGIQQI SVLKHVLVLH GAGVGGGSLV YANTLLVPAA RAFRDPRWPG SEDWSEKLAP
HYATARFMLG ARPARETFPA DELLREAVEE ETGRGSTFAR HTVGVYYGGE AGRTDPDPYF
GGEGPARTGC TLCGGCMTGC RHGAKNTLDR NYLFLAERRG CVIHAETKVT DVRPMPEGGY
EVRTVRSTRP LSVGSRVLRA RGVVLSAGAL GTVSLLLGCK ERGSLARLSD RLGDYVRTNS
EALLAVTARR GDVDYSRGIA ITSGVDADDD THVEIVRYGA GHDAMALLST HLTGHGPPWP
RWLRWIGNAF RHPLDFLRAH WPFGWARRTA VLLVMQPLSS HMRLRLARRP WGRALTTALS
DGQRPPTYMP LANALARRLA RKMDGVPQSG LHEVLLGASS TAHILGGATM GASPAEGVCD
SGGRVFGYEH LYVADGSLVP ANLGVNPSLT ITALAEHVMS GIPANPEGTP KPAPRPPSGG
|
|---|
| |