| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_3005 |
|---|
| Symbol | |
|---|
| ID | 5375543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 3492959 |
|---|
| End bp | 3494608 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 640844530 |
|---|
| Product | GAF sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001380186 |
|---|
| Protein GI | 153005861 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.303527 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 0.898724 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCCG GCGGCTCACC CCCCCACGTC GCCGTGCTCG CCGCCGAGAT GCTCCGGGCG
CGCAGGGAGG AGATCCTGTC CGCCTGGGAA GCGGCGGTCC GCGGGCTCCC GGGTTCGCGC
GAGCTCTCCC GCGCCGCGCT GCGGGACGAC GTCCCCGCGC TCCTGGATCG GGTGGCCGCG
GAGCTCGCCG GCGGCGGGAC GGCGGGGGAT CCCGGCGCGC ACGGGCGCCA CCGGGCGGCG
CAGGGCGTGG AGGTCGAGAC CGTGATCTCG GAGCTGTCCG CGCTCCGCGG CTGCGTCGTG
CGCGCGTGGG CGGACGCCTC CGTCCTCACC GTGGACGCGC TCGCCGCGCT CGAGCGGGCG
CTGCACGACG CGGTCGCGGC GGCGGCGCGG GCCGCGGCCG ACGCGCGCGA GCGCTTCTTC
TCCGCCCGCG CGCGGGAGCT CGCGCTCCTC GCGCGCGTCA GCGACGAGCT CGCGGCCCGC
CCCGAGCTCA CCGCCCAGCT CGACCGCGCG GCGGAGCTCG CGGTGCCCGA CTTCGCCGAC
TGGTCCGCCA TCGTGCTGCT CGAGCCCGGG GGGAAGCTGA GGCGCATCGC GGTCCACACC
GCCGACCCCG AACGGCGCGC GCTCGCCCGC GAGGTGCTGG AGCGGTATCC CATCGACCTC
CAGGCCCAGC GCGGGCTCGG GCGCGTGCTG CGCGAGGGAG AGACGCTGCT CGTCGAGGAC
GCCGACTGCC GGTTCCCCGA GCTCGTCGGC GGCACCGCGG AGGGGCGGGC GCTCCTCGAG
CGGCTCGCCA TCCGTTCCTA CCTCGCGGTC CCGCTGCGCG GTCCGGCGGG CGTCATCGGC
GCCTTCGCGT TCGGGATGTC CACCTCCGGC CGGTGCTTCG ACGAGCGCTC GGTGCCGATC
GCGGTCGAGC TGGCCCGGCG CGCGGCCCTC GCGATCGAGA ACGCCCGTCT CCTCGAGGCG
GCCCGGCGCG AGGCGCGCGC GCGCGAGCAG CTCCTCGCCG TGGTCTCGCA CGATCTCCGG
ACGCCGCTCT CCGCGATCCG CATGGGCGCG CACCGCCTCC GGGCGTCCGC CGCCAGCGCG
GTGCCGGAGG CCCTCGGCGC CATCGCGGAC GTCATCCAGC GGTCGGCCGG ACGCATGGAG
CGGCTCATCG GCGACCTGCT CGACGTCGCG GCGGTGCAGG CCGGACGCCT CACGGTGGAC
CCGTCGCCCC GCCGCCCCGG AGAGCTCGTG CGAGAGGCGG TCGAGTCCAT GCAGAGCCTC
GTCCGCGGCC ACGGGGTGGA GCTGGACGTC GACGCGGCCC CCGATCTCCC GCTCGTTCTC
GCCGACCACG ACCGGATCCT CCAGGTGCTC GGGAACCTCG TCTCGAACGC CGTGAAGGTG
ACGGAGGCGG GGGGCCGGAT CGGCGTGCGC GCCGAACCCC GCGCGGCGGC GGTCCGGTTC
GCCGTCTCGG ACACGGGGCC GGGCATCGCT CCGGACGAGC TGGAGCGGAT CTTCGAGCCG
TACCGCCGTG GCGCGGGGGC GACCTACAGC GGCACCGGCC TCGGGCTCGC CATCGCGCGC
GGGATCGTGG AGGCGCACGG CGGTCGCATC GGGGTCGAGA GCGCCGTAGG AGCGGGGAGC
ACCTTCTGGT TCACCTTGCC CGTCGCGTGA
|
|---|
| Protein sequence | MQPGGSPPHV AVLAAEMLRA RREEILSAWE AAVRGLPGSR ELSRAALRDD VPALLDRVAA
ELAGGGTAGD PGAHGRHRAA QGVEVETVIS ELSALRGCVV RAWADASVLT VDALAALERA
LHDAVAAAAR AAADARERFF SARARELALL ARVSDELAAR PELTAQLDRA AELAVPDFAD
WSAIVLLEPG GKLRRIAVHT ADPERRALAR EVLERYPIDL QAQRGLGRVL REGETLLVED
ADCRFPELVG GTAEGRALLE RLAIRSYLAV PLRGPAGVIG AFAFGMSTSG RCFDERSVPI
AVELARRAAL AIENARLLEA ARREARAREQ LLAVVSHDLR TPLSAIRMGA HRLRASAASA
VPEALGAIAD VIQRSAGRME RLIGDLLDVA AVQAGRLTVD PSPRRPGELV REAVESMQSL
VRGHGVELDV DAAPDLPLVL ADHDRILQVL GNLVSNAVKV TEAGGRIGVR AEPRAAAVRF
AVSDTGPGIA PDELERIFEP YRRGAGATYS GTGLGLAIAR GIVEAHGGRI GVESAVGAGS
TFWFTLPVA
|
|---|
| |