Gene Anae109_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_3002 
Symbol 
ID5377771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp3489033 
End bp3490715 
Gene Length1683 bp 
Protein Length560 aa 
Translation table11 
GC content78% 
IMG OID640844527 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001380183 
Protein GI153005858 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00428288 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.624214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTTCT TCCAGGACCC GCCCAGGCTC GCCAACGCCT ACCTGTCGGA CCCGCTCCTC 
CGCGAGCACC TCGCCCGGGC ACTGTCCGGG ACGCTGCCGG AGGCCGAGCC GGAGCTCGAG
CACCTCGGTG AGCTCGCGGC GGGACGGCTG TTCGCGCAGC AGGCCGCGGA GCGCCACCTG
GAGCCGAGGC TCGAGCCCTT CGACGCCTGG GGCCGCCGGG TGGACCGCGT CGAGCTCACG
CCGCTCTGGC GCGAGGCCGC CGCGCTGGCG GCGCGGCACG GACTCGTGGC CGCCGCGTAC
GAGCGGCGCC ACGGGGGCGC GTCGCGCGTG CACCAGCTCG CGCTCGTGTA CGTGCTCGAG
CCTTCGCTCG ACGTGTACGC CTGCCCGCTC GCGATGACCG ACGGCGCCGC GCGGACGCTC
CTCGACGCGG GGAACGCGGC GCTCGTCGCG CGCGCCCTGC CGCGCCTCAC CTCGCGCGAC
CCCGCGCGCA TGTGGACGAG CGGCCAGTGG ATGACGGAGC GGACCGGCGG CTCGGACGTC
TCCGGCACCG AGACCGTCGC CCGGCGCGAC GGCGAGGCGT GGCGGCTCCA CGGGACGAAG
TGGTTCTCGT CGGCGACCAC CGCGGAGATG GCGCTCGCGC TGGCGAGGCC GGACGGCGCG
CCCGCCGGCT CGCGCGGGCT CGCGCTCTTC TACCTCGAGA CGCGCGACGA GGACGGCTCC
ACGAACGGCG TGCTCGTGAA CCGGCTCAAG GAGAAGCTCG GCACCCGCAA GCTCCCGACG
GCGGAGCTGA CCCTCGACGG CGCCCTCGCG CTGCCGGTCT CGGGGCTCGC CGACGGCGTC
CGCGCCGTCG CGCCGATGCT GACCGTGACG CGCACCTGGA ACTCCGTCGT GGCCGCCGCC
GGGATGCAGC GCGCGCTCGC GCTCGCGCGC GATTACGCGC GCCGCCGCGC GGCGTTCGGC
GCGCCCCTCG CGCGGAAGCC CCTCCACGCG GACACGCTCG CCGGGCTCGA GGCGGAGCGC
GAGGGGGCGT TCCTGCTGGC GTTCCGGGCG GCGGCCCTCC TCGGCCGCGC CGAGTGCGGC
GAGGCGAGCG ACGCGGAGCG GCTCGCGCTG CGTGCCGTGA CGCCGCTCGC GAAGCTCACC
ACGGGCAAGC AGGCCGTGGC GGTCGCCTCC GAGGCGCTCG AGTGCTTCGG CGGTGCCGGC
TACGTCGAGG ACACCGGCCT CCCGCGGCTG CTCCGCGACG CGCAGGTGCT GCCGATCTGG
GAGGGCACGA CCAACGTGCT CGCCCTCGAC GTCCTGCGGG CGCTCGCCGG GGAGGGTACG
GCCGAGGCGC TCGCGGCCGA GATCCGCCGC CACCTCGGCG ACGCCCGCGA GCCCTCGCTC
CGGCCGGCGA TCGAGGCGGC GCGAGGCGCC CTCGAGCGAG CGCGCGCGTG GCTCGCCGAG
ACGGGCGGCC CGGCGCGCGA GGCGGGCGCG CGGCGCCTGG CGCTCACCCT CGGGCGCGCG
CTCGAGCTCG CCCTCCTGAT CTCGCACGCG CAGTGGTGCC TCGACCGGGG CCGCGGCCCC
CGCGCGCTCG CCGCCGCGCG CCGCCTCGCG CGGCACGGCG TCGATCTCCT CGCCGCGGAG
GAGCCCGGCC CGGAGGAGCT CGCGCTGCTC GCGGGGACCG CCGCGGACGG GGCCGATTCG
TGA
 
Protein sequence
MAFFQDPPRL ANAYLSDPLL REHLARALSG TLPEAEPELE HLGELAAGRL FAQQAAERHL 
EPRLEPFDAW GRRVDRVELT PLWREAAALA ARHGLVAAAY ERRHGGASRV HQLALVYVLE
PSLDVYACPL AMTDGAARTL LDAGNAALVA RALPRLTSRD PARMWTSGQW MTERTGGSDV
SGTETVARRD GEAWRLHGTK WFSSATTAEM ALALARPDGA PAGSRGLALF YLETRDEDGS
TNGVLVNRLK EKLGTRKLPT AELTLDGALA LPVSGLADGV RAVAPMLTVT RTWNSVVAAA
GMQRALALAR DYARRRAAFG APLARKPLHA DTLAGLEAER EGAFLLAFRA AALLGRAECG
EASDAERLAL RAVTPLAKLT TGKQAVAVAS EALECFGGAG YVEDTGLPRL LRDAQVLPIW
EGTTNVLALD VLRALAGEGT AEALAAEIRR HLGDAREPSL RPAIEAARGA LERARAWLAE
TGGPAREAGA RRLALTLGRA LELALLISHA QWCLDRGRGP RALAAARRLA RHGVDLLAAE
EPGPEELALL AGTAADGADS