| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_2959 |
|---|
| Symbol | |
|---|
| ID | 5377229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 3431366 |
|---|
| End bp | 3432547 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 640844486 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001380142 |
|---|
| Protein GI | 153005817 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTCC GCCCGACCCG CGCCGCGCTC CTCACCCTGG CCGCCGCCGC GCTCGCGGGC
GCGGTCGCGC TCGCGCTCCG GCCCGGGCGC GTGCCCGTGG AGGTGGGCAC CGTCGCGCGC
GGCCCCATCC GCGAGACCGT CGACGGCACC GGCAAGACGC GCGTGCGCGA GCGCTTCGTC
GTCTCGGCGC CGGTCTCGGG GCACCTCGAG CGGGTCGCGC TCCGGCCCGG GGATGAGGCC
GAGGCGGGGG CGGTGGTGGC GGTCGTGACC CCCGCCGCGT CGGCGCCGCT CGACGCGCGC
ACCCGCGCGG AGCTGCAGGC GCGGCTGCGA GTCGCGCGCG CGGCGCAGGA GGAGGTGCGC
GCCGCGGCGG ACCGGGCCGG GGTCGAGGCC GCGCAGGCCG GCCGGGACCT CGCGCGCGTC
CGGGCGCTCG CCTCGGGCGG CTCGGCGTCC GCGTCCAGCG TGGAGACCGC CGAGTCGGCC
GCGCAGGCCG GGGCGCAGGA GGCCGGCAGG GCGGAGCACG CCGTCCGCCG GGCGGCAGCC
GAGGTGGAGG CGGCGCGGGC CGCCCTGGCG GGCGCGTCGG CGCGAGGGGG AGAGCGCGTC
CCGCTCCGCG CCCCCGCCTC GGGACGGGTG CTCGCGGTGC TCCGCGAGAG CGAGGGGCCC
ATCGCCGCGG GAACGCCCAT CCTGGAGATC GGCGACTGCT GCGCGCTGGA GGTGGAGGTG
GAGCTCCTCA CGACGCAGGC GGTGCGCGTC TCGCCGGGCG CGCCGGTGGA GATCGTTCGC
TGGGGTGGTC CTGGCACGCT CGCCGGGCGC GTGCGCCGCG TGGAGCCGGC TGCCTTCACG
AAGGTCTCGG CGCTCGGCGT GGAGGAGCAG CGCGTCCTCG CGATCGTGGA TCCGGTGGGG
GAGGGCTGGA AGCGGCTCGG GGACGGGTTC TCGCTCGAGG CGCGCGTGGT GGTCGCCGCC
CGCGACGACG CCCTCCTCGT GCCGGCGTCG GCGCTCTTCC GCAAGGGCGA CCGGTGGGCC
ACCTTCGCCG TCGAGGGCGG GCGCGCCCGG CTCCGCGAGG TGACGATCGC GGAGCAGGGC
GAATCCCACG CGGCGATCGC GTCGGGCCTC GCGGAGGGCG ACCGCGTCGT GCTGCACCCG
ACCGACGCGC TCGCCGGCGG CACGCGCGTC AGGGCGCGGT GA
|
|---|
| Protein sequence | MAVRPTRAAL LTLAAAALAG AVALALRPGR VPVEVGTVAR GPIRETVDGT GKTRVRERFV
VSAPVSGHLE RVALRPGDEA EAGAVVAVVT PAASAPLDAR TRAELQARLR VARAAQEEVR
AAADRAGVEA AQAGRDLARV RALASGGSAS ASSVETAESA AQAGAQEAGR AEHAVRRAAA
EVEAARAALA GASARGGERV PLRAPASGRV LAVLRESEGP IAAGTPILEI GDCCALEVEV
ELLTTQAVRV SPGAPVEIVR WGGPGTLAGR VRRVEPAAFT KVSALGVEEQ RVLAIVDPVG
EGWKRLGDGF SLEARVVVAA RDDALLVPAS ALFRKGDRWA TFAVEGGRAR LREVTIAEQG
ESHAAIASGL AEGDRVVLHP TDALAGGTRV RAR
|
|---|
| |