| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_2947 |
|---|
| Symbol | |
|---|
| ID | 5377207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 3418678 |
|---|
| End bp | 3420495 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640844474 |
|---|
| Product | OPT family oligopeptide transporter |
|---|
| Protein accession | YP_001380130 |
|---|
| Protein GI | 153005805 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1297] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily
[TIGR00733] putative oligopeptide transporter, OPT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.504276 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACG TCTCCGCCCC GCCCGGCCCC GAGGATCCCG AGCGCCGCTG GCTCGCCGAG
GTCTATCAGC CGGACGCCCG CCAGCTGACG CTCCGCGCCG CGCTGGCGGG CTGCGCGCTC
GGAGCGGTGA TGGCGCTCTC GAACCTCTAC GTCATCCTCA AGACGGGGTG GAGCCTCGGC
GTCACGATCA CCGCCTGCAT CCTCGCGTTC GCCTTCTTCC GGGCGGCGCG CGCCGCCGGG
CTCGCGCGGA CGGAGTTCGG CCCGCTCGAG AACAACGCGA TGGCCTCCGT CGCCTCGTCC
GCGGGGTACA TGACCGGCGG CGGGAACATG GCGGCGCTCC CCGCGCTCCT GATGCTCACG
GGCGCGCGCC CGGACGCGCT CCCGCTCGTC GCCTGGTTCG CGACGATCGC GGCCCTGGGC
GTCTTCGTCG CCATCCCCAT CAAGCGCCAG CTCGTGAACC GCGAGCAGCT CCCGTTCCCG
ACCGGCACCG CGACGGCGGA GACGATCCGG GCCCTCCACG GCGACGCCTC GAGCGGCAAG
GCGCGGCTCC TCGGCGGCGC GGCGCTGCTC GGCGCGGCGC TGGCCTGGCT GAAGGACGCG
CCCGCCGCCT GGACGCCTCT GCGACTCCCC GCGACGCTCG GCCTCCCCTT CTCGATCGCA
GGGCTCCCCG CCGCGCGCTG GGGGCTCGCC GCCGAGACCT CGCTCCTGCT CGTCGGCTCG
GGCGCGCTCG TCTCCTTCCG CACCGGCTGG TCCATGCTCC TCGGCGCGTT CCTCACCTAC
GGCGTCCTCG CGCCGGCGAT GGTCGCGCGC GGCGCCATCG AGGCGGTCAC CTACCGCGCC
ATCGTCCAGT GGACGCTCTG GGGCGGCGCC GCACTGCTCG TCAGCTCGGG CCTGCTCACC
TTCGCCCTGC AGTGGCGGAG CGTCGTCGCG TCGCTCGGCG GCCTCGGGCG CGCGGTGCGC
GGCGGCGACC GCGGCGACCC GCTCGCCGCC GTCGAGGCGC CGGCGTCCTG GTTCGTCGGG
GGGCTGCTGG TGCTCGGTCC GGCGGTCGTG CTGCTCATGC GCGCGCTGTT CGGGATCCCG
CTCTGGGTGG GCGCGCTCAC CGTCCCCCTC GCGGTCGTGC TGGGGTTCAT GGCGGCGCGC
ATCACCGGCG AGACGGACAC CACGCCGACG AAGGCGTTCG GGCCGCTCAC GCAGCTCCTG
TACGGCGGGC TCCTCCCCGG CCAGCTCGTG CCGAACCTGA TGGGGGCGAA CGTGACGGGG
GGCATCGGCC TCCACGCGGC GGATCTCCTC ACCGACCTCA AGAGCGGCTA CCTCCTCGGC
GCGCGCCCCC GCCCCCAGCT CGCGGCGCAG CTCCTCGGCA CGATCGTCGG GGCGGCGGCG
ATCGTGCCGG TGTTCGACCT GCTCGTGCCG GACGCGAGCG TGCTCGGCTC GGAGAAGTTC
CCCGCCCCCG CCTCCCAGGT GTGGGCGGGC GTCTCGCGCG TCCTCGCGGC TGGCGTCGGC
GCGCTCCACC CGACGGCGCG GGTGGCGATC GCCGCCGGCG CGGCGCTCGG AGCGGCGCTG
GTCCTGCTCG AGCGCCTCCT GCCGGCCCGG GCGCGCGCGT TCGTGCCGAC CGCCTCGGGC
CTCGGCCTCG CCATGGTCAT CCCGGGCACG AGCTCGATCG CGATCTTCGT CGGCGCGACG
CTCGCCGACG CCCTGCGGAG GACGCGGCCG GCGCTCGCGG ACGCGGCCGT GCTCCCCGTG
GCGTCCGGGC TGATCGCCGG CGAGAGCCTC ATGGGCATCG TCGTGGCGAT CGTGCTCGCG
CTGGGGCTCG GCGGGTGA
|
|---|
| Protein sequence | MLDVSAPPGP EDPERRWLAE VYQPDARQLT LRAALAGCAL GAVMALSNLY VILKTGWSLG
VTITACILAF AFFRAARAAG LARTEFGPLE NNAMASVASS AGYMTGGGNM AALPALLMLT
GARPDALPLV AWFATIAALG VFVAIPIKRQ LVNREQLPFP TGTATAETIR ALHGDASSGK
ARLLGGAALL GAALAWLKDA PAAWTPLRLP ATLGLPFSIA GLPAARWGLA AETSLLLVGS
GALVSFRTGW SMLLGAFLTY GVLAPAMVAR GAIEAVTYRA IVQWTLWGGA ALLVSSGLLT
FALQWRSVVA SLGGLGRAVR GGDRGDPLAA VEAPASWFVG GLLVLGPAVV LLMRALFGIP
LWVGALTVPL AVVLGFMAAR ITGETDTTPT KAFGPLTQLL YGGLLPGQLV PNLMGANVTG
GIGLHAADLL TDLKSGYLLG ARPRPQLAAQ LLGTIVGAAA IVPVFDLLVP DASVLGSEKF
PAPASQVWAG VSRVLAAGVG ALHPTARVAI AAGAALGAAL VLLERLLPAR ARAFVPTASG
LGLAMVIPGT SSIAIFVGAT LADALRRTRP ALADAAVLPV ASGLIAGESL MGIVVAIVLA
LGLGG
|
|---|
| |