| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_2899 |
|---|
| Symbol | |
|---|
| ID | 5377527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 3345805 |
|---|
| End bp | 3348030 |
|---|
| Gene Length | 2226 bp |
|---|
| Protein Length | 741 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640844427 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001380083 |
|---|
| Protein GI | 153005758 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.00149711 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGC CTGCCCTGAA TACACCCCCC GACACCCTCC GGACCCTCCC GGGGGACGAC
GTGCGCCAGC TGATGTGGCG GTTCGCGGAT CGCTACGACC TCCAGATGCT GGTGCAGTCG
GCGCGCGGGG TGGCGCGCGG ACCGGTCGCG CGGCTCGTCG CCGACGGTGG GCGCAACGCG
CACGAGTGGA CCGCGCGCAA GAACGAGCTC CTCTCTCACT ACGACGCCTC GGGCATCACG
GCGGCGTTCA TGGAGCCGGA GGAGGGTGGG TTCATCACGG GGCCGAAGAA CCTCGCCCTG
GCGCTCGCCG CCTTCGAGCT CGCCTGGGTC GACGCGGGCG CGGCGACCGG CGCCCTCGCG
GGCTTCCTCG GGCTCTCCCC GATCCACGAG CGCGGCACGC CGGAGCAGCT GAGGCACTAC
ATGAGCCTGG CCGCGCCCGC GAAGCCGGGC GAGGACCGCG CGCCGTGGCG GGCGGCGTTC
GCGCTCACCG AGCCCATCCC GTACGTGGGC GTGGACACCG GGATGCTCTC CGGGAAGGTG
AGCGTCGCGG AGTGGAGCCC GGGGGCGGAG CCGGTGCTGC AGGTCGAGAA GCGCGGCCGG
TTCATCACGA ACATGGGGTT CGCGAACTTC GTCACCGCGG CGGTGGACAC CGCCGACCCG
CGCATCAAGT CCTCCTGTCT CGTGATCCTC GAGGAGACCG ACCCCGGGAC CTTCGACCGC
GGCACGCCCA CGAAGAAGCT CGTGCACCAG CTCTCGTCGA CGAGCGATCC CATCTTCAGC
CTGCGCGTCC CGGCCAGCCG GATCGTGGGC GGATACACCG TCAAGGACGG GGTCATCGTC
CCGAACTTCG ATCACTCGCA GGTGATCGAG GCCGTCTTCC GGCGCACGCG CGTGACCGTG
GGGGTCATGA CGTCCGCGAA GCTGCTCAGC GCGGTCGAGC CGGTGATCCG TTACCAGCGG
GGGCGGTTCC GCGGGGCCGA GCAGGCCGCG CCCGGCTCCG TGCGCTACGA GCTCGGCATC
CAGCAGCGCG AGGACGCGCT GCACCGGCTC GTGGACGTGT GGGCGGCGGG AGAGGCGGGC
GCGTCGCTCG GCTTCGCGAC GGCGCGGCTC TTCGACGAGC TCGATCCGCT CGAGAGGAAG
AAGGACGCCG CGCTCGCCGC GCAGGGCATC GGCGGGATGA AGGCGACCAT GAAGTGGATG
AAGGCGCTGG AGCGGAGCGC CCTCGAGCTG CTGGAGCTGG AGGCGCACCC GCGCGGCGAG
AAGCAGGAGG CGCGCATCGC CGAGCTCCGC GGCGACGAGC TGGTCCGCTT CGCGCTGCTC
GACGCGCAGG CGAACGTCCT CTGCCCGGCG ACGAAGCTCT GGAACACCGG CGTGGGCGCG
GACTTCATGC GCGAGGCGGT CTCGCTCATG GGCGGCTACG GCATCACCGA GGACTGCCCC
GGCTTCCTGG GCCAGAAGTG GATGGACGCC CAGCTGGAGG CCACGTACGA GGGGCCCGAG
GCCGTCCAGC GGCGCCAGCT GTCGGTGACG ATGGGCAATC CGCTCTTCCT CGCGCAGCTG
AAGGCGTGGG TCCGCGAGCT CCGGCACCTC TCCGGCGAGC ACCCGGGCCT CGGCGGGTGC
GTGATCGCCT CGGCCATGGA CCTCTGGCTC TGGACCTACC GCCACCTCGA GCGCTCGACG
GACGCGGACG GCGTGAAGCT CGTCCAGTCC CCGCGCCAGG GGGTCACCTT CAAGCTCGCG
GACGCGCTCG GGTGGCTCGT CGCGTCCCGC GCGCAGATCC TCGACGCGGT CGTCCTCGCC
GAGGAGGGGG GCGCGGTGCT CGGGGAAGCC CACGCCGGCA CCGCCCGCTT CTTCGCCGAC
CTGTGCCACG CGCAGGCGGC GCGGACCGCG GGCGAGGTGG GCCGCATCTG CGCCGAGCTC
GTCCACGGCT ACAACCGCCA CCCGTCCTGG GACGCCGAGG GGCGCGCGGC GTGCTGGTCG
GCGAGCGACG CCGACGCGCT CGAGGGGATC ATCCCCGGGC TCGCCGGCTG CTCGGTGGAC
GTGCTCACCG AGGGCGCCCA CCCCGACAAG GAAGGCCCGT GCGCCTCGTG CCAGGGCATC
AGCGACTTCC GTTCGCTGCG CGTCAAGGTC GACGGGTGCC TGACGGGCGC GATGCTCGCC
AAGGATCGCG CGGCGGAGGC CCTCTCGAAG GTGATGATCC CCGAGGCGCT CGACTACCCG
CTGTAG
|
|---|
| Protein sequence | MATPALNTPP DTLRTLPGDD VRQLMWRFAD RYDLQMLVQS ARGVARGPVA RLVADGGRNA
HEWTARKNEL LSHYDASGIT AAFMEPEEGG FITGPKNLAL ALAAFELAWV DAGAATGALA
GFLGLSPIHE RGTPEQLRHY MSLAAPAKPG EDRAPWRAAF ALTEPIPYVG VDTGMLSGKV
SVAEWSPGAE PVLQVEKRGR FITNMGFANF VTAAVDTADP RIKSSCLVIL EETDPGTFDR
GTPTKKLVHQ LSSTSDPIFS LRVPASRIVG GYTVKDGVIV PNFDHSQVIE AVFRRTRVTV
GVMTSAKLLS AVEPVIRYQR GRFRGAEQAA PGSVRYELGI QQREDALHRL VDVWAAGEAG
ASLGFATARL FDELDPLERK KDAALAAQGI GGMKATMKWM KALERSALEL LELEAHPRGE
KQEARIAELR GDELVRFALL DAQANVLCPA TKLWNTGVGA DFMREAVSLM GGYGITEDCP
GFLGQKWMDA QLEATYEGPE AVQRRQLSVT MGNPLFLAQL KAWVRELRHL SGEHPGLGGC
VIASAMDLWL WTYRHLERST DADGVKLVQS PRQGVTFKLA DALGWLVASR AQILDAVVLA
EEGGAVLGEA HAGTARFFAD LCHAQAARTA GEVGRICAEL VHGYNRHPSW DAEGRAACWS
ASDADALEGI IPGLAGCSVD VLTEGAHPDK EGPCASCQGI SDFRSLRVKV DGCLTGAMLA
KDRAAEALSK VMIPEALDYP L
|
|---|
| |