| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_2731 |
|---|
| Symbol | |
|---|
| ID | 5374612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 3166803 |
|---|
| End bp | 3168008 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 640844258 |
|---|
| Product | riboflavin biosynthesis protein RibD |
|---|
| Protein accession | YP_001379916 |
|---|
| Protein GI | 153005591 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
|---|
| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGGG TCGTCAGCCG CGGCCGCCGC TCTCCGGCCC TGCGCGCCCG TCGCGCTGCG
CCCCGCGCCG CCGCGCCCGA CGAGGCCGCC CGCGAGGCGT TCATGCGCGC CGCGGTGCGC
GAGGCGACGA AGGGGCTGGG CCGGACGAGC CCCAACCCCG CCGTCGGCGC GGTGCTGGTG
AAGGGCGGGC GGGTCGTCGC TCGCGGCCAC CACGCGCGGG CGGGCGGTCC TCACGCCGAG
GTGGTCGCGC TGCGCGCCGC GGGCGCCCGC GCGCGCGGCG CAGACCTCTA CACGACGCTC
GAGCCCTGCG ACCACTTCGG GCGGACCCCG CCATGCTCCG TGGCGGTGCT CGAGGCGGGC
GTCCGCCGCG TGTTCGTCGG CTCCGCCGAT CCCAACCCGC TCGTGAACGG GCGGGGCGTC
GCCCGCCTCC GCGAGGGAGG GGTCGAGGTG GTGACCGGCG TGCTGCGGGA GACCTGCGAC
GAGCTCAACG CGCACTGGTT CACCTTCATC ACCGAGCGGC GCCCGCACGT GACGCTCAAG
GCGGCGGTCA CCCTGGACGG CCGGATCGCG ACGCGCACCG GCGACGCGCG CTGGGTGACG
GGCGAGCCGG CGCGCCGCTG GGTGCACCGG CTGCGCGACC GGGTGGACGC GGTGCTCGTG
GGCAGCGGCA CCGCCCGCGC GGACGATCCG CGCCTCACCA CCCGGCTCCC CGGCGGGCGC
GGGCGCGATC CCATCCGCGT GGTGCTGGAC ACGGATCTCT CGCTCCCGCG GGATCTGAAC
CTGTTCCGGC AGCGCTCCGC GGCCCCGACC CTCGTCGCGC ACGCCTCGGC GCGCGCCCGC
GACCTCGGCC CGCGGATCGA GCTCCTGCGC TGCCGCCGCG GCCCGGGCGG CGTCGACCTC
CGCGACCTGC TCGCCCGCCT CGCGGCGCGC GGCGTGACGC ACCTGCTCGT GGAGGGCGGG
GCGCGGGTCC ACGCGCGCTT CCTGCAGGAG GGGCTCGTCG ATCGCGTCGC CATCTTCGTG
GCGCCCAAGA TCGCCGGGGG CGACGGCATC CCGCTCGTCG CCGGCCGGGG GCCGGCGCGG
ATGGCGGACG CGCTGTCGCT CGCGGACGTG CGGGTCGAGC GGGTGGGCGA CGACGTCCTC
GTGACCGGCA CGCCGGCGCG CCGGGGCCCG CGTGGCCTGT TGGCTAAAAA TCCCCGCCGG
GGCTAG
|
|---|
| Protein sequence | MSRVVSRGRR SPALRARRAA PRAAAPDEAA REAFMRAAVR EATKGLGRTS PNPAVGAVLV
KGGRVVARGH HARAGGPHAE VVALRAAGAR ARGADLYTTL EPCDHFGRTP PCSVAVLEAG
VRRVFVGSAD PNPLVNGRGV ARLREGGVEV VTGVLRETCD ELNAHWFTFI TERRPHVTLK
AAVTLDGRIA TRTGDARWVT GEPARRWVHR LRDRVDAVLV GSGTARADDP RLTTRLPGGR
GRDPIRVVLD TDLSLPRDLN LFRQRSAAPT LVAHASARAR DLGPRIELLR CRRGPGGVDL
RDLLARLAAR GVTHLLVEGG ARVHARFLQE GLVDRVAIFV APKIAGGDGI PLVAGRGPAR
MADALSLADV RVERVGDDVL VTGTPARRGP RGLLAKNPRR G
|
|---|
| |