Gene Anae109_2552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2552 
Symbol 
ID5375286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2957937 
End bp2958725 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content74% 
IMG OID640844071 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001379737 
Protein GI153005412 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.442854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.93857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGTGA GGGTGAGCTA CTCGGATCTC GCCGGCCGGC GCGCGCTCGT GACGGGTGCG 
TCCTCCGGCA TCGGCCTCGG CGTGGCCGAG GCCTTCCTCG AGCAGGGGCT GAAGGTGGCG
GTGCACTACC GCTCGAACCG GGCCGCGGCC GAGGCGCTCG CGGCGCGCTT CGCCGGGCGC
GCGGTGGCGA TCCAGGCGGA GCTCGGGACG GAGGCGGGCT GCGTGGCGTG CGTGGCGGAG
GCGGCGAGGG CCCTCGGAGG CCTCGACCAG ATCGTCCACT CCGCCGCGAT CTGGAACGAG
GGGCCGATCG AGCGGATCGC GGCGGCGCAG CTCGAGGAGA TCTTCCGCGT CAACGTGTTC
AGCGCCTTCT ACCTCGTGCG CGAGGCCATG CCCTTCCTCG GGCGGAGCGG GCGCGGCAAC
GTCGTCTTCA TCGGCTCGAC CGCCGGCCAG CGCGGCGAGG CGCGCCACGG CCACTATGCG
GCGACCAAAG GCGCGCTGCA GTCGCTCGCG ATGAGCCTCG CGGTGGAGCT CGCGCCGCGC
ACGCGCGTGA ACGTCGTCTC GCCGGGCTGG GTGCGCACGC CGATGGCCGA GGTGGAGCTG
AAGGACGTCG GCGCGGCCAT CGCGGGGGCG CTCCCGAACC GGCGGGTCGG CGAGGTCGAG
GACGTGGTCC ACGCCTGCCT CTATCTCGCG AGCGAGGCCT CCGGCCACCT CGTCGGGGAG
GATCTGTGCG TCTCCGGCGG CGCTCTCCTG GTCGTCCCGC GCGGCCAGAT CGTCGCGTCG
GAGCGGTAG
 
Protein sequence
MNVRVSYSDL AGRRALVTGA SSGIGLGVAE AFLEQGLKVA VHYRSNRAAA EALAARFAGR 
AVAIQAELGT EAGCVACVAE AARALGGLDQ IVHSAAIWNE GPIERIAAAQ LEEIFRVNVF
SAFYLVREAM PFLGRSGRGN VVFIGSTAGQ RGEARHGHYA ATKGALQSLA MSLAVELAPR
TRVNVVSPGW VRTPMAEVEL KDVGAAIAGA LPNRRVGEVE DVVHACLYLA SEASGHLVGE
DLCVSGGALL VVPRGQIVAS ER