| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_2503 |
|---|
| Symbol | |
|---|
| ID | 5377285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 2899684 |
|---|
| End bp | 2900913 |
|---|
| Gene Length | 1230 bp |
|---|
| Protein Length | 409 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 640844022 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001379688 |
|---|
| Protein GI | 153005363 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.00151754 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCCC TCGCCCTCGC CGTCGCCCTC CACGCTTCCC CCGCGCTCGC GCAGGCGGCG
CAGCCGGATG CCGCTGCCGC GCCGGCGGCC CCGGCCGCGA GCGGAGCTCC CGAGGCCGCT
CACCCCGAGC GTAGCGGCTC CGCGACAGCG GAGACGCGGA GTCGAGGGGC CGCGACCGCG
ACCGCGACCC CTGCCGGATC TCCTGAGGCC GCTCATCCCG AGCGTAGCGA CTCCGCGACA
GCGGAGGCGC GGAGTCGAGG GACGAGCCCG ACCGCGACCC CGGCCGGATC TCCTGAGGCC
GGTCCCTCCG CCGCTGTCGC GGAGAAGCTC GCGCAAGGGG ATCGCGCCTT CGGGGCCGGA
GACTTCCGCG GCGCGCTCTT CGCGTACCAG GACGCGGTCT ACCTCCAGCC CGGCTACGCG
TTCGCACGCG TGAAGCTCGG TCGCGCCTAC CTCGCGCTCC GCTACCCCGC GCAGGCCATC
GCCCAGGCGG AGCTCGTGCT CGCCGCGGAT CCTGCCGACG AGGAGGCGCG CCGCCTGAGC
GACGACGCGC GGGCGCCGAG GTCCGTCGCG ACGGGGCCCG CCGTTCCGCC CGTGCCCTCG
GCTCCGTCCC CGGGCGTCGC GCCGCCCTCT CCAGGTGCCG CGGCTCCCGC TGGGGCCGCG
GCCGCGGCGG CGCCGTCCAT CCCGGCCGGC GCGACGGTGG TCGTGGTCAT GCCCGCGGGC
TCCGCGCCCG CCCTCGCGCT CCCCAGCGCC GCGGCGGCTC CGGCCCCCTC CACGTCCGCG
AGCCCTCAGC CGCGCATGTA CCGGCTGCCG CCGGAAGGAG CCGGGGCCCC CGCACCCGCG
GCGAGCGCGC CGGGCGCGCT GCCGTCCGCC GGCCAGAGAT ACCGGAGCGC GCTCGACCTG
GTGGCCCGCC GCGATTACGC CGGGGCGATC GCGCTGCTGA ACGAGGCGAT CGCGCTGGAG
CCGCGACTCG CGGTCGCCTA CACGGCGCGC GCGAGCGCCC GGTTCGGGCT CGGCCGTTTC
CGCGAGGCCG CCGACGACTA CAAGGCGGCG CTCGGCCTCG ACCCCGCGCT CGCCACGCCG
CTGTACGGCC TCGGCGAGTG CTACAGGCTC CTGGGCGATC CCCTCGCCGC CGAGCTGTAC
GCACGGTACG CGGCGAGCCG CGCCTCCGAC GTGCGCGAGG ATCTCCGGGT CATCGCGCGC
GATCGTGCGG AGGACCTCTC GCGCCGCTGA
|
|---|
| Protein sequence | MRALALAVAL HASPALAQAA QPDAAAAPAA PAASGAPEAA HPERSGSATA ETRSRGAATA
TATPAGSPEA AHPERSDSAT AEARSRGTSP TATPAGSPEA GPSAAVAEKL AQGDRAFGAG
DFRGALFAYQ DAVYLQPGYA FARVKLGRAY LALRYPAQAI AQAELVLAAD PADEEARRLS
DDARAPRSVA TGPAVPPVPS APSPGVAPPS PGAAAPAGAA AAAAPSIPAG ATVVVVMPAG
SAPALALPSA AAAPAPSTSA SPQPRMYRLP PEGAGAPAPA ASAPGALPSA GQRYRSALDL
VARRDYAGAI ALLNEAIALE PRLAVAYTAR ASARFGLGRF REAADDYKAA LGLDPALATP
LYGLGECYRL LGDPLAAELY ARYAASRASD VREDLRVIAR DRAEDLSRR
|
|---|
| |