Gene Anae109_2497 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2497 
Symbol 
ID5377254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2893344 
End bp2894504 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content78% 
IMG OID640844016 
Product2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 
Protein accessionYP_001379682 
Protein GI153005357 
COG category[I] Lipid transport and metabolism 
COG ID[COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase 
TIGRFAM ID[TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.000228145 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATCCGCG ATGAGCGGGT GGCGGCGATC CTGGCGGCGG GGGGCTCGGG GGTGCGCGCC 
GGCCTGAGGA AGCAGTGGCT CGAGCTCGGG GGTGAGAGCG TCCTGCGGCG GGCGGCGCGC
GCGCTCGTCG CCTGCGACGC CGTGGACGAG CTCGTGGTGG TGGTCCCGTC GGGTGAGGAG
GGCCGCGGCC TCGCTGAGGT GGAGGGGCTC GGTCGACCGG CGCGGGCGAT CGCGGGCGGC
GCGGCGCGCG CCGACTCCGT GCGGAACGGC GCGCGCGCGG CGGAGGGCTG CGGGATCGTG
CTCGTGCACG ACGCGGCCCG CCCGTTCGCG ACGCCGGGCC TGGCGGCGCG CGTGGCCGAG
GCGGCGGCGC GCGACGGCGC GGCCCTCGCG GCGCTGCCGG TGACGGACAC GGTGAAGCGC
GCCGCGCCGC GTGACGGTGC GCCGATCGTG GAGGCCACGC TCGATCGGCG CGCGCTGTGG
CTGGCGCAGA CGCCGCAGGG CTTCCGGCGC GCCCTCCTCC TCGAGGCCTT CGAGGCGGCG
GGGGACCGCG CCGCGGAGGC GACCGACGAG TGCGCCCTCG TCGAGGCGCT CGGCGCGCCC
GTCACCCTCG TCCCGGGCGA GCCCGGCAAC TTCAAGATCA CGGGGCCCGA CGACGTGGCG
CGCGCCCGGT CCATCCTCGA GGCCCCGGTG GCGATGGGCG TCGGCTACGA CACCCACCGC
TTCGCGGAGG GGCGCCGGCT GGTGCTCGGG GGCGTCGAGT TCGAGGGCGA CGGTCTCCTC
GGCCACTCCG ACGCGGACGT CTGCGCGCAC GCCATCGGCG ACGCCATCCT CGGCGGCGCC
GGCCTCGGCG ACCTCGGCCG GCACTTCCCG GACACGGACC CGCGCTGGAA GGGGGTCTCT
TCGCTCGCCC TGCTGCGCGA GATCGCCGCG AAGGTTGCGG CGGCCGGCTT CCGGGTGGGC
AACTGCGACG TGACGCTCGC CGCGCGCCGG CCGAAGATCG CGCCGCGCGC GGAGGAGATG
CGGGCGCGCC TCGCCGAGGC GCTCGGCGTC ACGCCGGGGC AGGTCAACGT GAAGGCCACC
ACGGGCGAGG GGATGGGGTT CGTCGGGCGC GGCGAGGGGA TCGCCGCGCA CGCCGTCGCG
CTCCTCGTCA GAGTGCGGTA G
 
Protein sequence
MIRDERVAAI LAAGGSGVRA GLRKQWLELG GESVLRRAAR ALVACDAVDE LVVVVPSGEE 
GRGLAEVEGL GRPARAIAGG AARADSVRNG ARAAEGCGIV LVHDAARPFA TPGLAARVAE
AAARDGAALA ALPVTDTVKR AAPRDGAPIV EATLDRRALW LAQTPQGFRR ALLLEAFEAA
GDRAAEATDE CALVEALGAP VTLVPGEPGN FKITGPDDVA RARSILEAPV AMGVGYDTHR
FAEGRRLVLG GVEFEGDGLL GHSDADVCAH AIGDAILGGA GLGDLGRHFP DTDPRWKGVS
SLALLREIAA KVAAAGFRVG NCDVTLAARR PKIAPRAEEM RARLAEALGV TPGQVNVKAT
TGEGMGFVGR GEGIAAHAVA LLVRVR