Gene Anae109_2488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2488 
SymboluvrC 
ID5377155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2881472 
End bp2883622 
Gene Length2151 bp 
Protein Length716 aa 
Translation table11 
GC content73% 
IMG OID640844007 
Productexcinuclease ABC subunit C 
Protein accessionYP_001379673 
Protein GI153005348 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.820608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0424579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGA ACCTCAGGAA GACGCTCGAC GAGCTGCCCG CCGAGCCCGG CTGCTACCTC 
ATGAAGGACC GCCGGGGGGC GGTGGTGTAC GTCGGCAAGG CGTCGAGCCT GCGCTCGCGC
GTCCGCTCCT ACTTCGACGC CTCGCGCGGC GACGATCGCG CCTTCGTGGC GCTCCTCGAC
GAGCTCCTCG GCGACGTCGA GGTGATCGTG ACGCGCTCGG AGAAGGAGGC CGTCCTCCTC
GAGAACGAGC TCATCAAGCG GCACCGGCCG CGCTTCAACA TCCGGCTGCG CGACGACAAG
GACTTCATCG TCCTGCGCCT CGACGAGCGC CACGCGTTCC CGCGGCTCGA GGTCCGCCGC
GCCCGCGAGC CGCGCCGGGC CGGGGCGCGC TACTTCGGCC CCTACTCGTC GGCGAGCTCC
ATCCGCGAGA CCTTGCGGGT GGTGAACCGG CACTTCCAGC TCCGCACGTG CACCGACCAC
GTGTTCGAGC ACCGCAAGCG GCCGTGCATC CTCTACCAGA TCAAGCGCTG CCCGGCGCCG
TGCGTGTACG ACGTGCCGGA GGCGGAGTAC CGGCAGTCGG TCGAGGACGC GATCGAGTTC
CTCGAGGGGC GGGAGACGGA GCTGGTGGAG CGGCTCCACG GCCGCATGGA CGAGGCCGCG
GACGCGCTCC GCTTCGAGGA CGCGGCGCGG CTGCGGGATC AGCTGCAGGC GGTGGAGCGG
AGCCTCGAGA AGCAGCGCGT CCTCATGGCG GATCGGGCCG ACCGCGACGT GGTGGGGCTC
TACCGCGAGG GGCCCGACCT CGTCGTGCAG GTGCTCGCCA TGCGCGCCGG CAAGCTGCAG
GACTCGCGCA GCTACCCCTT CCACGAGCAG GAGTTCCCGG ACGAGGAGAC GCTCTCGTCG
TTCCTGTCGC TCTACTACGA GCAGAACGCC GCGCCGGAGG AGATCCTCGT CCCGGTGGAG
CCGGCGGAGG TGGACGCGCT GGCCGACGTC CTCTCCGAGC GGCGCGGCCG CCGCGTCCGG
CTCCTCACGC CGCAGCGGGG CGCCAAGGCG GACCTGCTCG AGGTGGCCGC GCGCAACGCG
GAGCAGGGGT TCCGGAGCTG GCACGAGAAG GACGAGCGGC GCGAGCAGGC CCTCGCGGCG
CTCACGCGCG CGCTGCACCT CGCCCGGCCG CCCCGCTGGA TGGAGTGCTA CGACATCTCG
ACGTTCCAGG GCGCGCTCGC CGTCGGCTCG GGGGTGTCGT TCAGGGACGG CGAGCCCGAC
AAGGCGTGCT ACCGCCGGTA CAAGGTCAAA GGGGTGGCGG GGCAGGACGA CTTCGCCATG
CTGTACGAGG TCGTGTCGCG CCGGCTCCGG CGCGCCCTCG GCGAGGGGGC GTTCCCGGAC
CTGCTCGTGA TCGACGGCGG CAAGGGCCAG CTCAACGCGG CCCTCGCCGC GGCGAAGGAC
CTCGGCGTCC CCACGAAGCC GTCGCCCGGG AACGAGGGCG CGCCGTTCGT GGAGCTGGTG
GGGCTCGCCA AGAGCCGGCT CGTGGACGCC CCGGCGCTCG GGACGACGCG GGTCATCGGC
CGCCGTGGAC GGGGTGGCGG CGCCTCGCGA GCCGCGAGCG GCGCGGCGGC GCTGGCGGAC
GCGGCGGAGG CTCAGGAGCA CGGGTTCGTC TCCGAGCTCG CGCGGAGCCC CGAGCGCGTG
TTCCTGCCCG GCCGCAAGGA TCCGGTGGTG CTGCGGCAGA ACTCGGCGGA GCTGTTCCTC
CTCGCCCGCC TGCGCGACGA GGCGCACCGC TTCGCCATCA CCTTCCACCG CAAGCTCCGC
CGCGAGCGCA ACTTCCAGAG CGTGCTCGAG GAGATCTCCG GCATCGGCGA GGGGCGGAAG
CGGGCGCTGC TGCGCCACTT CGGAGCGCTG AGGCGCGTGA AGGAGGCGAC GCTCGACGAG
ATCTCGCAGG TGGACGGTTT CGGACCGAAG CAGGCGCGGG CCGTGTTCGA GTTCTTCCAT
CCGCCCCGGC GCGAGGGCGC CGAGGGCGCC GCGGTCGTGG GCCCGCCGTC CGCCGCGGCC
GCTCCGCCGA TCGAGACCGC TGCGGTCGCC GAGGCGGTCA GCGAGGAGGA CATCGACGCC
GCGCTGGCAG CGGAGGACGA GGACGCGGAA GGACCGGCGC CCGTCGAGTG A
 
Protein sequence
MDANLRKTLD ELPAEPGCYL MKDRRGAVVY VGKASSLRSR VRSYFDASRG DDRAFVALLD 
ELLGDVEVIV TRSEKEAVLL ENELIKRHRP RFNIRLRDDK DFIVLRLDER HAFPRLEVRR
AREPRRAGAR YFGPYSSASS IRETLRVVNR HFQLRTCTDH VFEHRKRPCI LYQIKRCPAP
CVYDVPEAEY RQSVEDAIEF LEGRETELVE RLHGRMDEAA DALRFEDAAR LRDQLQAVER
SLEKQRVLMA DRADRDVVGL YREGPDLVVQ VLAMRAGKLQ DSRSYPFHEQ EFPDEETLSS
FLSLYYEQNA APEEILVPVE PAEVDALADV LSERRGRRVR LLTPQRGAKA DLLEVAARNA
EQGFRSWHEK DERREQALAA LTRALHLARP PRWMECYDIS TFQGALAVGS GVSFRDGEPD
KACYRRYKVK GVAGQDDFAM LYEVVSRRLR RALGEGAFPD LLVIDGGKGQ LNAALAAAKD
LGVPTKPSPG NEGAPFVELV GLAKSRLVDA PALGTTRVIG RRGRGGGASR AASGAAALAD
AAEAQEHGFV SELARSPERV FLPGRKDPVV LRQNSAELFL LARLRDEAHR FAITFHRKLR
RERNFQSVLE EISGIGEGRK RALLRHFGAL RRVKEATLDE ISQVDGFGPK QARAVFEFFH
PPRREGAEGA AVVGPPSAAA APPIETAAVA EAVSEEDIDA ALAAEDEDAE GPAPVE