Gene Anae109_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2393 
Symbol 
ID5376686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2773394 
End bp2774524 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content71% 
IMG OID640843913 
Producthomocitrate synthase 
Protein accessionYP_001379579 
Protein GI153005254 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR02146] homocitrate synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.310246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGA CCACCTGGAA GCTCATCGAC ACGACGCTGC GCGAGGGTGA GCAGTTCGCG 
AAGTCGTCCT TCCGCACCGA GGACAAGCTC GAGATCGCCC GCGCGCTCGA CACGTTCGGC
GTGGACTACA TCGAGGTCAC GACGCCCGCG GCCTCGCCGC AGTCGCAGCG CGACCTCGCC
CAGATCGTGA AGCTGGGCCT CGCCGCCCGG ATCATCACCC ATACCCGCTG CATCCTCGAC
GACGTCAAGG CGGCGCTGGA CGCCGGCGTG CGCGGGATCG GCATCTTCTT CGCGACGAGC
CGCATCCTGC GCGAGGCCTC CCACGCGAAG TCGCTGCAGC AGATCGTGGA CGCGATGGGG
CCGCCCATCG AGGCGGCGCT CGCGGCCGGG CTCGAGGTCC GCTTCTCCGC CGAGGACGCC
TTCCGCTCCG ACGTGCACGA CCTGCTCGCC GTCTACCGCG CGGCGGAGAA GCTCGGGGTG
CACCGCGTGG GGGTGGCCGA CACGGTGGGG ATCGCCACGC CGCGCCAGGT CTACGCGCTC
TTCCGCGAGG TGCGGAGCGC GGTGAAGTGC GATCTCGGCT TCCACGGCCA CAACGACACG
GGCTGCGCGA TCGCCAACGC CTACGAGGCG ATCTCCGCGG GCGCGACGCA CGTGGACGTC
TCGGTGCTCG GGATCGGCGA ACGGAACGGG ATCACCCCGC TCGGCGGGAT CGTGGCCCGG
ATGTTCGCGC TCGAGCCGCA GGCGGTCGCC GAGCGCTACC GGCTCGGGCA GCTCCGCGAG
CTCGAGCGGC TCGTGGCGCG GGTGACCGGG GTCGAGATCC CCTTCAACAA CTTCGTCACC
GGCGAGACCG CCTACTCCCA CAAGGCGGGC ATGCACCTCA AGGCGATGAT GACGAACCCG
GGCGCCTACG AGATCATCCC CCCCGAGGCG TTCGGGCTCA GCCGGCGGCT CATCGTGGGC
AGCCGCCTCA CCGGCCGGCA CGCCATCGCC TACCGGGCCC GCGAGATGGG GATCACCTTC
GGCGAGTCGG AGCTGAAGGC GATCACCCGC CGCATCAAGG AGCTGGCGGA CGCGGGCGAG
CTGTCCGAGG AGCAGATCGA CGCGGTCCTG CGCGACTGGG TGACCGCGTG A
 
Protein sequence
MAKTTWKLID TTLREGEQFA KSSFRTEDKL EIARALDTFG VDYIEVTTPA ASPQSQRDLA 
QIVKLGLAAR IITHTRCILD DVKAALDAGV RGIGIFFATS RILREASHAK SLQQIVDAMG
PPIEAALAAG LEVRFSAEDA FRSDVHDLLA VYRAAEKLGV HRVGVADTVG IATPRQVYAL
FREVRSAVKC DLGFHGHNDT GCAIANAYEA ISAGATHVDV SVLGIGERNG ITPLGGIVAR
MFALEPQAVA ERYRLGQLRE LERLVARVTG VEIPFNNFVT GETAYSHKAG MHLKAMMTNP
GAYEIIPPEA FGLSRRLIVG SRLTGRHAIA YRAREMGITF GESELKAITR RIKELADAGE
LSEEQIDAVL RDWVTA