Gene Anae109_2389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2389 
Symbol 
ID5376682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2764923 
End bp2765729 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content78% 
IMG OID640843909 
ProductHAD family hydrolase 
Protein accessionYP_001379575 
Protein GI153005250 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.202304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.812427 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCG ACCTGCTCGC CCCCGCCTCG CGCGCCGCCG TCGCCGCCTT CGCCCACGAC 
CGCGCGCTCC TCGCCTTCGA CTTCGACGGC ACGCTCGCGC CCATCGTCGA GGATCCCGCG
CGCGCGGCGA TGCGCCCGGA CACCCGCGCG CTCCTGCGCG TCGCGGCGCT GCTCTACCCG
TGCGTCGTCG TCTCCGGGCG CTCGCGGGCG GATCTCGCGC CGCGCCTCGA AGGCATCCCG
CTCGTCGCCT GGGTCGGCAA CCACGGCGCC GAGGCGGGCT TCGGTCCGGT GGATCGCTCG
CCGCGCTCCG CCGTGCTCGC CTGGCGCGGC GCGCTCGCGG CGCGACTCGG CGCCATGCCC
GGCGTCGAGG TCGAGGACAA GGGGCTCTCG CTCGCCGTCC ACTACCGCCG CGCCCCCGAC
CCGGTCGCGG CCGAGCGCGA CATCCGCGCG GCCACCCTGG AGCTCCCCGG CGCGCGCGTG
TTCGGCGGGC ACTGCGTGGT GAACGCCGTC CCGGGCGACG CCCCGACCAA GGGGGACGCC
ATCGCGGAGC TGCTCGAGCG GAGCGGCTGC CGGACCGCGC TCTACGTGGG GGACGACACC
ACCGACGAGG ACGCGTTCCG CGCGCCCGGC GTGATGGGCG TCCGGATCGG GGAGGGTGCC
GGGAGCGCCG CCGCTTACCG GCTCGCGTCG CAGGAGGGGA TCGACGAGCT CCTGCGCCTG
CTCGTCGAGG AGCGCAGCCG GCTCGACGGG CAGCGCGCCC GCGCGGAGTC GCTCGCTCGC
GCCGTGAGGT CCTCGCGCGA GGCCTAG
 
Protein sequence
MIPDLLAPAS RAAVAAFAHD RALLAFDFDG TLAPIVEDPA RAAMRPDTRA LLRVAALLYP 
CVVVSGRSRA DLAPRLEGIP LVAWVGNHGA EAGFGPVDRS PRSAVLAWRG ALAARLGAMP
GVEVEDKGLS LAVHYRRAPD PVAAERDIRA ATLELPGARV FGGHCVVNAV PGDAPTKGDA
IAELLERSGC RTALYVGDDT TDEDAFRAPG VMGVRIGEGA GSAAAYRLAS QEGIDELLRL
LVEERSRLDG QRARAESLAR AVRSSREA