Gene Anae109_2383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2383 
Symbol 
ID5378274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2757264 
End bp2758856 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content78% 
IMG OID640843903 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001379569 
Protein GI153005244 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.182874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0987183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGCC GCGCCATCGC GCTCGCGGCG GCGCTCGCCG TGGGCTGCGG CGGGGCGTCG 
AGCGCCACCC CGTCCGGGCC GAAGGCCGAG GGCGTCAGCG CCGAGCGTGG CTCCGACGCG
ACGGGCGCGC AGCGCGGTCA CGGGCCGGAC GACGGGCACG GCCACGGGGG TGAGGCCCCC
GCCCCGGCGC GCTGCGCGCA CCGCGTGCCC GCCGAGCTCT GCACGCGCTG CAACCCCGAT
CTCGCGCCCG TGTTCCAGGC GCAGGGCGAC TGGTGCGCGG AGCACGGCGT GCCGGAGTCG
CAGTGCCTGG AGTGCAACCC GAAGCTCACG TTCGCGGCCG CGCCTGCGCC CGCCGACTGG
TGCAGGGAGC ACGGCGTGCC CGAGTCGAGG TGCACGAAGT GCGACCCGCG CCTCGTCGCG
AAGTTCGTGG CGGCGAACGA CTACTGCCGC GAGCACGGCT TCCCCGAGTC CGACTGCCCG
CGCTGTCACC CCGAGCGCCT CGCGGCGGCC GGCGCCGCGC CGCCCCCGTT TCCGGAGCCG
GGCACCCGCG TGGTGCTCGC CTCCGCGCGG GTCGCCGACG AGGCGGGCAT CGAGACCGCG
CGCGTCGAGC CGCGCGAGCT CGCGCGGACG CTGGAGGTGG TAGGCCAGCT CGCGTTCGAC
GGGAACCGTC TGGCCCAGCT CTCCCCGCGC GCGGAGGCGC GGGTGCTCGA GGTGAAGGCC
GACCTGGGCG ACGACGTCCG GGCGGGCGAT CCCCTCGTGG TGCTCGCCTC GGCCTCGGTG
GGCGAGGAGC AGGCGCGCCT CGCGGCGGCG CAGGCGCGCC TCGCCGCCGC CCGCGCCGCG
GCGTCACGCG CGGACGCGCT GGTGCAGGAC GGGCTCGCGC CGCGCAAGGA GGCGGAGGAG
GCGCGCCGGG AGCTCGCGGC TGCGCAGGCG GAGCACGACG CCGCCCGCGG CTCGCTGGTG
GCCGCGGGGG CCGCCCCCGG TGCGGCCGCG GGCCGGCACG TGCTGCGCGC GCCGCTGGAC
GGCACGGTCG TGTCGCGCGA CGCGGTCGCC GGCCGCTCCG TCTCGGCCGG GCAGGTGCTC
ATGGAGATCG CGGACCTCTC GCGGATGTGG GCGGAGCTCG AGGTGCCCGA GGCGACCGCA
GGACGGGTCC AGCCCGGACA GCCGGTGCGG GTCACGCTCG AGGGGGTCCC GGGCGGCCCG
CTGGAGGGGA AGATCGCGCG GGTCTCGCCG CGGGTCGATC CGGCCTCGCG CACGGTGCGC
GCGCGCGTCG AGCTCCCCAA CCCGAGGCGC GCCTTGAAGG CGGGAACCTT CCTCCGCGCG
GAGATCCGGG TCTCCGAGCC GCACTCGGCG CTGCTCGTCC CGCGCGAGGC CGTGCAGCAC
GTCGAGGGGC GCGCGGTCGT GTTCGCGCGC CGCGAGCCGC GCGTGTTCGA GCCGGTGGCG
GTGGAGCTGG GTGAGGCGGA GGGCGGCGCG GTCGAGATCC GGGGCGGCCT CCCCGCGGGC
GCCGAGGTCG TCACCACCGG CGCCTTCTTG CTCAAGACCG AGATCTCGAA GGAGTCCATC
GGCGCGGGCT GCTGCGATCT CGAGGAGCGC TGA
 
Protein sequence
MSRRAIALAA ALAVGCGGAS SATPSGPKAE GVSAERGSDA TGAQRGHGPD DGHGHGGEAP 
APARCAHRVP AELCTRCNPD LAPVFQAQGD WCAEHGVPES QCLECNPKLT FAAAPAPADW
CREHGVPESR CTKCDPRLVA KFVAANDYCR EHGFPESDCP RCHPERLAAA GAAPPPFPEP
GTRVVLASAR VADEAGIETA RVEPRELART LEVVGQLAFD GNRLAQLSPR AEARVLEVKA
DLGDDVRAGD PLVVLASASV GEEQARLAAA QARLAAARAA ASRADALVQD GLAPRKEAEE
ARRELAAAQA EHDAARGSLV AAGAAPGAAA GRHVLRAPLD GTVVSRDAVA GRSVSAGQVL
MEIADLSRMW AELEVPEATA GRVQPGQPVR VTLEGVPGGP LEGKIARVSP RVDPASRTVR
ARVELPNPRR ALKAGTFLRA EIRVSEPHSA LLVPREAVQH VEGRAVVFAR REPRVFEPVA
VELGEAEGGA VEIRGGLPAG AEVVTTGAFL LKTEISKESI GAGCCDLEER