Gene Anae109_2356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2356 
Symbol 
ID5377094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2721750 
End bp2724044 
Gene Length2295 bp 
Protein Length764 aa 
Translation table11 
GC content73% 
IMG OID640843875 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_001379542 
Protein GI153005217 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.736998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0891785 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACCTGA CCCCTCCCAG AGGCCCCGCG CCCGTCACCG CGGTCGGAGC GAACGCGCTG 
GCGGAGCTGC TGTTCGACGA GGCAGGAAGC GGGCGGTGCC TCGTCGCGCC GGACGGCACC
GTCCTCCGCG CGAACCCCGA GTGGCTCCGC GCCACGGGAC TCACCCTGGA CGAGGCCATC
GGCCGAGACG TCCTCGAGCT GCTCCCGCAA GCGCGCGAAG CCGCGATCGC GGCGCGAACG
CTCGCGCCGG CCGGACAGCG TACCGACCTG CCCCGGCACG CGCGGTGGGT CGCCGGGCGC
GAGACCTGGT GGGAGGGGAC CCTGTCGCCG GTTCCGATGG AGGCGGGGTG TGGGCTGCTC
GTCACGCTGC GAGACGTCAC GGCCGACGCG ACCGCGAGCG AGGCGGCCGT CGAGGAGGCG
CTGTGCAGGA GCGATGCGCG CGCCGCCGCG GTGTCGAGGA ACATGCGCGA TCACCTCGTG
CTGCTCGAGG CGGTGCGCGG ACCTACGTGC GAGATCGAGG ACTGGCGCTA CGTCGACGCG
AACGAGGGCG CGCTGGAGCT GCTCGCCAAG ACGCGCGACG GCCTGATCGG GCGGACCGTC
CGGGAGGTCC TCGGAGCGCG GGCCGCCGGC GTGCACGAGC GCATGGTGCG CGTGCTGGAG
ACCGGGGTCC GGGAACGCTA CGAAGCGACG TTCCGGGACA GAGCCCTGCT CATCACGATC
TTCCCGGTGG ACGCGGACAC CGTCGGCAGC GCGGCGGTCG ACGTCACCGA GCGCGTGCGC
GGCGAGGAGG AGCGCAGGCG GGTCGAGGCG GCGCTTCGGG AGTCGGAGGC GCGGTACAGG
CTGCTGTTCG ACTCCATCGA CGAGGGCTTC TGCATCATCG AGGTGCTGTT CGACGCCGCG
GGCGCCCCCG CGGACTACCG GTTCGTCGAG GTCAATCGCG CGTTCGAGAA GCAGACCGGG
CTCGTCGACG CGGCGGGCAA GCGCATGCGC GAGCTCGCGC CCGCGCACGA GGAGCACTGG
TTCCAGATCT ACGGCAGGGT CGCCCTGACC GGCGAGCCGA TCAGGTTCGA GAACCGAGCC
GAGGCGCTGG GCCGGGTCTA CGACGTGTAC GCCTTCCGCG TGGGGCCTCC CGAGGGACGA
CGGGTGGCCA TCCTGTTCAG CGACATCTCG GAGCGGAAGC GCGTCGAGGA GAAGCTGCGC
GAGGCCGATC GACGCAAGAG CGAGTTCCTC GGGGTGCTCT CGCACGAGCT CCGCAACCCG
CTCGCGCCCA TTCGCAACAG CACCCTCATC CTCGAGCGCG CGCCCGCCGG GAGCCCGGCG
GCGGTGCGTG CCAGGGAGGT CATCCAGCGC CAGACGGAGC ACCTCTCCCG GCTCGTCGAC
GACCTGCTCG ACGTGGAGCG CATCGCGAGG GGCAAGGTCC AGCTCTCCCG GACGCGGCTC
GACCTGCGGG ACGTGGTCCG CAAGACGTGC GACGATCACC GCTCGGTGCT CGAGCAGGGC
GGCGTCGAGA TGCGCCTCGA CCTCCCGTTC GGACCGGTGT GGGTCGAGGG GGACGCGACG
CGAATCTCGC AGGTCGTCGG CAACTTGCTC CACAACGCGG CGAAGTTCAC GGCGGCGGGC
GGACGCGTGG AGGTGGAGGT CGCGAGCCGC GAGGAGAATG GGCTGATCGC CGTGCGCGAC
ACCGGCGCCG GCATGATCCC CGAGGACCTC GAGCGCATCT TCCAGCCGTT CGCGCAGGGC
GAGCAGGGCC TCGCGCGCAC CGAGGGAGGG CTCGGCCTCG GGCTGGCGCT CGTGAAGGGG
CTCGTCGAGC TCCACGGCGG GTCGGTGCGG GCGAGGAGCA AGGGGCCGGG GCGCGGCAGC
GAGCTGACCG TGCGGCTGCC GCTCGCGGCC GCGGGCGCGA CCACCCTCCG GCGCCGGGGC
CGTGCGGAGA CCGCCCCCCG GCGGATCCTC GTCATCGAGG ACAACCTCGA CGCCGGGCAG
ACGCTGGCGG ACCTCCTGGA GCTCGAGGGT CACCGAGCCC ACGTCGCCAG CGACGGCCGG
GAGGGGATCG CGCTGGCCCG CGAGCTGAAG CCGGACGTCG TGCTCTGCGA CATCGGCCTG
CCCGACATGA GCGGCCACGA CGTCGCTCGC GCGCTCCGAT CCGACGCCAC GCTCCGCTCG
ACGCGGCTCA TCGCGCTCAC CGGGTACGCG CAGCCGGAGG ATCGGCAGCG CGCGCGGGAG
GCGGGATTCG ACGGCCACCT CCCGAAGCCG CCCGATCTCG AGGAGCTGTG GCGCTCGATC
GAGGAACGGT CGTAG
 
Protein sequence
MHLTPPRGPA PVTAVGANAL AELLFDEAGS GRCLVAPDGT VLRANPEWLR ATGLTLDEAI 
GRDVLELLPQ AREAAIAART LAPAGQRTDL PRHARWVAGR ETWWEGTLSP VPMEAGCGLL
VTLRDVTADA TASEAAVEEA LCRSDARAAA VSRNMRDHLV LLEAVRGPTC EIEDWRYVDA
NEGALELLAK TRDGLIGRTV REVLGARAAG VHERMVRVLE TGVRERYEAT FRDRALLITI
FPVDADTVGS AAVDVTERVR GEEERRRVEA ALRESEARYR LLFDSIDEGF CIIEVLFDAA
GAPADYRFVE VNRAFEKQTG LVDAAGKRMR ELAPAHEEHW FQIYGRVALT GEPIRFENRA
EALGRVYDVY AFRVGPPEGR RVAILFSDIS ERKRVEEKLR EADRRKSEFL GVLSHELRNP
LAPIRNSTLI LERAPAGSPA AVRAREVIQR QTEHLSRLVD DLLDVERIAR GKVQLSRTRL
DLRDVVRKTC DDHRSVLEQG GVEMRLDLPF GPVWVEGDAT RISQVVGNLL HNAAKFTAAG
GRVEVEVASR EENGLIAVRD TGAGMIPEDL ERIFQPFAQG EQGLARTEGG LGLGLALVKG
LVELHGGSVR ARSKGPGRGS ELTVRLPLAA AGATTLRRRG RAETAPRRIL VIEDNLDAGQ
TLADLLELEG HRAHVASDGR EGIALARELK PDVVLCDIGL PDMSGHDVAR ALRSDATLRS
TRLIALTGYA QPEDRQRARE AGFDGHLPKP PDLEELWRSI EERS