Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_2301 |
Symbol | rpsA |
ID | 5376103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 2606604 |
End bp | 2608340 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640843820 |
Product | 30S ribosomal protein S1 |
Protein accession | YP_001379487 |
Protein GI | 153005162 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0539] Ribosomal protein S1 |
TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.75877 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCCCGA CAAAGGTTGG TCTTTACCGA ATGGAGAACC AGACTCCCCG TACGCCCGAA ATCGAGACCG AGGACTTCGC GACGCTCTTC GCGCAGAGCG AGGCGCAGGC CGGTCCCATC GAGGAGGGCA AGGTCGTCCC TGGCACCGTC ATCGCGCTCT CCAAGGACTA CGCCGTCATC GACATCGGCT ACAAGTCCGA GGGCCAGGTG CCGATCTCCG AGTTCATCTC GGCGCCCGGC GGCGAGCCCG CCGTCAAGGT CGGCGACAAG GTCGAGGTGC TCGTCGAGTC CCGGGAGAAC GACACCGGGA TGGTCGTCCT CTCCAAGGAG AAGGCCGACA AGATGCGCAT CTGGGACGAG ATCTCCGCCG CGTGCGAGCG CGACGAGCTC GTCGAGGGCG TGATCGTCGG CCGCGTGAAG GGCGGCCTCT CCGTCGACAT CGGCGTGAAG GCGTTCCTCC CCGGCTCGCA GGTCGACATC CGGCCGGTGC GGAACCTCGA CAAGCTGATC GGCGAGAAGT TCAAGTTCAA GGTCATCAAG TTCAACAAGA AGCGCGGCAA CATCGTCCTG TCGCGCCGGG TCCTCCTCGA GAAGGAGCGC GAGGAGCTCA AGAAGGAGAC CCTGAAGAAC TTGAAGGAGG GCGCGATCCT CAAGGGCCAG GTGAAGAACC TGACCGACTA CGGCGCCTTC ATCGACCTCG GCGGCATCGA CGGCCTGCTC CACGTCACCG ACATGAGCTG GGGCCGCATC GGCCACCCGT CGGAGATGTT CGAGGTCGGC CAGGAGGTCC GCGTCGTCGT CCTCAAGTTC GACCCGGCCT CCGAGCGCGT CAGCCTCGGC CTCAAGCAGA TCCAGGAGGA CCCGTGGCAC CGCGCCGACG AGAAGTATCC GGTCGGCACG CGCGTCAGGG GCAAGGTCGT CTCGCTCACC GACTACGGCG CGTTCATCGA GCTCGAGCAG GGCGTCGAGG GCCTCGTCCA CGTCAGCGAG ATGAGCTGGA CGAAGCGGGT GAAGCACCCG TCGAAGCTCG TCAACCAGGG CGATCAGGTC GAGGCGGTCG TGCTCGACAT CGATCCGAAG GCGAAGCGGA TCAGCCTCGG CATGAAGCAG ATCGAGGCGA ACCCGTGGAC GCTGCTCGAG GACAAGTATC CCATCGGCAC GACCATCCGC GGCGAGGTCC GGAACGTCAC CGACTTCGGC GTGTTCGTCG GCGTCGAGGA GGGCATCGAC GGCCTCGTGC ACGTGTCCGA CATCTCCTGG ACCGAGCGCA TCAAGCACCC GGGCGACAAG TTCAAGAAGG GTGACGTGGT CGAGGCGGTG GTGCTCAACA TCGACGTCGA GAACGAGCGC TTCAGCCTCG GCATCAAGCA GGCCCACGTC GATCCCTGGA CGACGCTCTC CGAGCGCCAC CCGGTGGGCG CGCGCGTGAA GGGCAAGGTG ACGAAGGTCA CCGACTTCGG CGCGTTCGTC GAGATCGAGC CGGGCATCGA GGGCCTCGTC CACGTCTCCG AGATGAAGGA CGAGCGCGTC GAGAACCCCC GCGACGTCGT GACCGAGGGC CAGGAGGTCG AGGTCAAGGT CATCGACATG GACCTCCACG AGCGCAAGAT CGCGCTGTCG ATCAAGCAGC TCAACCGCGA CGGCGGCGAG GAGGACTACC GCGAGTACCT GCGCCGTCAG GGCGACGGCC GCGCGCGGCT GGGGGACCTC ATGGAGAAGT TCAACCGCAG GAAGTAG
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Protein sequence | MIPTKVGLYR MENQTPRTPE IETEDFATLF AQSEAQAGPI EEGKVVPGTV IALSKDYAVI DIGYKSEGQV PISEFISAPG GEPAVKVGDK VEVLVESREN DTGMVVLSKE KADKMRIWDE ISAACERDEL VEGVIVGRVK GGLSVDIGVK AFLPGSQVDI RPVRNLDKLI GEKFKFKVIK FNKKRGNIVL SRRVLLEKER EELKKETLKN LKEGAILKGQ VKNLTDYGAF IDLGGIDGLL HVTDMSWGRI GHPSEMFEVG QEVRVVVLKF DPASERVSLG LKQIQEDPWH RADEKYPVGT RVRGKVVSLT DYGAFIELEQ GVEGLVHVSE MSWTKRVKHP SKLVNQGDQV EAVVLDIDPK AKRISLGMKQ IEANPWTLLE DKYPIGTTIR GEVRNVTDFG VFVGVEEGID GLVHVSDISW TERIKHPGDK FKKGDVVEAV VLNIDVENER FSLGIKQAHV DPWTTLSERH PVGARVKGKV TKVTDFGAFV EIEPGIEGLV HVSEMKDERV ENPRDVVTEG QEVEVKVIDM DLHERKIALS IKQLNRDGGE EDYREYLRRQ GDGRARLGDL MEKFNRRK
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