| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_2220 |
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| Symbol | |
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| ID | 5377390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter sp. Fw109-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009675 |
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| Strand | - |
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| Start bp | 2516822 |
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| End bp | 2521009 |
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| Gene Length | 4188 bp |
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| Protein Length | 1395 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640843732 |
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| Product | DNA-directed RNA polymerase, beta' subunit |
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| Protein accession | YP_001379406 |
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| Protein GI | 153005081 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.99768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.00360343 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGGACA TCTTCAATTT CTTCGAGAAG CCGAAGGATC CGCTGTCGTT CTCCGCGATC
CGCATCTCGC TCGCGAGCCC GGACAAGATC CGCCAGTGGT CCCACGGCGA GGTGAAGAAG
CCGGAGACCA TCAACTACCG GACCTTCAAG CCGGAGCGCG ACGGCCTCTT CTGCGCGAAG
ATCTTCGGCC CCGTGAAGGA CTACGAGTGC AACTGCGGCA AGTACAAGCG CATGAAGCAC
CGCGGGGTCG TCTGCGAGAA GTGCGGCGTC GAGGTGATCC AGTCGAAGGT CCGCCGCGAG
CGGCTCGGCC ACATCACCCT CGCCACGCCG GTCGCGCACA TCTGGTTCCT GAAGTCCCTC
CCCAGCCGCA TCGGGAACCT GCTCGACATC ACCCTGAAGG ACCTCGAGAA GGTCCTCTAC
TGTGAGTCGT ACATCGTCAT CGATCCGAAG GAGACCACGC TCCAGCGGGG CGAGCTCCTC
TCGGAGGACC GCTACCACAA GTCGATGGAG GAGTTCGGCG AGGAGGCCTT CCTCGCCGGC
ATGGGCGGCG AGGCGGTCCT CGAGCTCCTC AAGGTCGTCG GGCCGGCGGA CAAGGGCCAC
GGCGAGGGCG TGCACGGGCT CGCGGACGAG CTGCGCGCGC AGATGAAGGA GGCCACGAGC
GACGCGAAGC GGAAGAAGAT CGCCAAGCGG CTCAAGGTCG TCGAGGCGTT CGTCCAGTCC
GGCAACAAGC CCGACTGGAT GATGCTGGAG GTCATCCCGG TCATCCCGCC GGACCTCCGC
CCCCTCGTCC CGCTCGACGG CGGCCGGTTC GCCACCTCCG ACCTGAACGA CCTCTACCGG
CGCGTCATCA ACCGCAACAA CCGCCTGAAG CGGCTCCAGG AGCTGAACGC CCCGGACATC
ATCATCCGCA ACGAGAAGCG GATGCTGCAG GAGGCCGTGG ACGCGCTGTT CGACAACGGC
CGGCGCGGCA AGACCATCAC CGGCCCGAAC AAGCGGCCCC TCAAGTCGCT GAGCGACATG
CTCAAGGGCA AGCAGGGGCG CTTCCGCCAG AACCTGCTCG GCAAGCGCGT CGACTACTCC
GGCCGCTCCG TGATCGTGGT CGGCCCGGAG CTCAAGCTCC ACCAGTGCGG CCTGCCGAAG
ATCATGGCCC TCGAGCTGTT CAAGCCGTTC ATCTACAACA AGCTCGAGGA GAAGGGGTAC
GTCACCACCA TCAAGAGCGC GAAGAAGATG GTGGAGAAGG AGCGCCCCGA GGTCTGGGAC
ATCCTCGACG AGGTGATCCG CGAGCACCCG GTGCTGCTGA ACCGCGCCCC GACGCTCCAC
CGCCTGGGCA TCCAGGCCTT CGAGCCGGTG CTCATCGAGG GCAAGGCGAT CCAGCTGCAC
CCGCTCGTCT GCACCGCCTT CAACGCCGAC TTCGACGGCG ACCAGATGGC CGTGCACGTG
CCGCTCTCCA TCGAGGCGCA GATGGAGGCC CGCGTGCTCA TGATGAGCAC GAACAACATC
CTGTCGCCCG CGCACGGCAA GCCGATCATC GTGCCGAGCC AGGACATCGT GCTCGGCATC
TACTACATGA CCCGCGAGCG GGCGTTCGCG CGCGGGGAGG GCAAGGTCTT CGCCAGCGAG
GAGGAGGTCC GCGCCGCCTA CGACCAGGGC GAGGTGGATC TCCAGGCCAA GATCTGGGTG
CGCCTCGACG GCAAGCGCGT CGAGACCACG GTCGGCCGCG TGCTGCTCTA CGACATCGTG
CCGAAGCGGC TGCCGTTCGA GTCCATCAAC AAGGTGATGG ACAAGAAGCA GCTGCAGAAC
CTCATCGACC TGACGTACCG GCTCTGCGGC GAGAAGGAGA CGGTGCTCCT CGCGGACCGC
GTCCGCTCGA TGGGCTACGG CAACGCTACG CGCGCGGGCA TCTCCATCGC CCTCGAGAAC
ATGATCATCC CGAGGAAGAA GCAGGAGCTC CTCGAGCGCG CGATGGGCGA GGTCGACGAC
ATCCAGACCC AGTACACCGA GGGTCTCATC ACCATCGGCG AGCGGTACAA CAAGGTCATC
GACATCTGGG CGCAGGTCAC CGAGGAGGTG GCCCAGGAGA TGATGTCGCA GATCGGCCAG
GAGACGGCGA TCGGGACGGG CAAGGACGGG AAGCGCGAGG AGCGCAAGCA GCCCTCGTTC
AACCCGATCT ACATCATGGC CGACTCCGGC GCCCGAGGCT CGGCGCAGCA GATCCGGCAG
CTCGCCGGCA TGCGCGGCCT GATGGCCAAG CCCTCGGGCG AGATCATCGA GACGCCCATC
ACCGCGAACT TCCGCGAGGG CCTCAACGTC CTGCAGTACT TCATCTCGAC GCACGGCGCC
CGCAAGGGCC TGGCCGACAC GGCGCTCAAG ACCGCGAACT CAGGCTACCT GACCCGCCGC
CTCGTCGACG TGGCCCAGGA CGCGATCATC ACCGAGTACG ACTGCGGCGC GATGGACGGC
ATCACCCTCG GCGCGCTGGT CGAGGGCGGC GAGATCATCG AGCCGATGGG CGAGCGCATC
CTCGGCCGCG TCGCGCTCGA CGACATCCAC GACCCGTTCG CCTCGAGCGT CCTCGTGAAG
GCGAACGAGG AGATCGACGA GAGCAAGGTC AAGCTCATCG AGAACGCCGG CATCGACAAG
GTGAAGATCC GGTCGGTGCT CACCTGCCAG GCGCGGCGCG GCATCTGCGT CGAGTGCTAC
GGGCGCGATC TCGCCCGCGG GCGCAAGGTG AACATCGGCG AGGCGGTCGG CGTGATCGCC
GCTCAGTCGA TCGGCGAGCC GGGCACGCAG CTCACGATGC GGACCTTCCA CATCGGCGGC
GCGGCCTCCC GGCGGGCGGA GCAGTCGACG ATCGAGAACC GGAACCCCGG CCTCGTGAAG
TTCCACAACG TGGCCGTGGC GAAGAAGAAG GACGGCACGC TCATCGTCAT GAACCGCAAC
GGCGAGATCA TCGTCACCGA CGACCAGGGC CGCGAGCGGG AGCGCTACGG CGTGGTCTAC
GGGGCGAAGC TCCTCGTCCG CGACGGGCAG AAGATCGAGA CGAGCACGCT GCTCGCCGAG
TGGGATCCCT ACTCGATGCC GATCATCACG GAGGTCGCCG GCCACGTGAA GTACGGCGAC
CTCGTCGACG GCGTCACGAT CAGCGAGCAG GTGGACGAGA TCACCGGCCT CGCCCGGAAG
GCGGTCATCG CCTCCAAGGA TCCGGACGCG CGCCCGCGCA TCTCGATCAA GGACGACCAG
GGGAAGACGC GGAAGCTCGC CAACTCCGAG GCGGACGCCC GCTACATGCT CCCCGAGGGC
GCCAACCTCG TGGTGAACGA CGGCGACGAG GTGGACGCCG GCGACGTCAT CGCGAAGATG
CCCCGCGAGA CCACCAAGAC GAAGGACATC ACCGGCGGTC TCCCGCGCGT CGCCGAGCTC
TTCGAGGCCC GCAAGCCCAA GGAGCACGCG GTCATCTCCG AGATCGACGG CGTGGTCGCC
TTCGGCAAGG ACACGAAGGG CAAGCGCAAG GTGGTCATCA CGCCCGAGGT GGACGGCAAG
CTCCGCCCCG ATCTCGCGAA GGAGTACCTG ATCGGCAAGG GCAAGCACAT CTCGGTGCAC
ACGGGCGACC GGGTGCGGGC GGGCGAGGCG CTCATGGACG GCGCCGCCAA CCCGCACGAC
ATCCTCCGCG TGCTCGGCGA GAAGGAGCTG GCCCGCTGGC TGGTGGACGA GGTGCAGGAG
GTCTACCGGC TCCAGGGCGT GAAGATCAAC GACAAGCACA TCGAGACGAT CGTCCGGCAG
ATGCTGCGCC GCGTGCGGAT CGTCGACGTG GGCGACACCA ACTTCCTCGC GGACGAGCAG
GTGGAGAAGT TCGTGTTCGA GGAGGAGAAC GACAAGGTGA TCACGGCGGG TGGCCGCCCG
GCCCAGGGCG AGCCGCTGCT GCTCGGCATC ACCAAGGCGT CGCTCTCCAC CGAGTCGTTC
ATCTCGGCGT CGTCCTTCCA GGAGACGACG AAGGTGCTGA CCGAGGCCGC CATCAGCGGC
AAGGTCGATC ACCTCCGCGG CCTCAAGGAG AACGTCATCA TGGGCCGGCT CATCCCGGCC
GGCACCGGCC TGCCGCACTA CAAGCACCTC GACATCGAGG TCGAGACCCC GGTCGACGCG
GTGGAGGAGG CGGAGGAGGC CCTCGCCGTC GCGAGCGGGG AGGAGTAG
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| Protein sequence | MKDIFNFFEK PKDPLSFSAI RISLASPDKI RQWSHGEVKK PETINYRTFK PERDGLFCAK
IFGPVKDYEC NCGKYKRMKH RGVVCEKCGV EVIQSKVRRE RLGHITLATP VAHIWFLKSL
PSRIGNLLDI TLKDLEKVLY CESYIVIDPK ETTLQRGELL SEDRYHKSME EFGEEAFLAG
MGGEAVLELL KVVGPADKGH GEGVHGLADE LRAQMKEATS DAKRKKIAKR LKVVEAFVQS
GNKPDWMMLE VIPVIPPDLR PLVPLDGGRF ATSDLNDLYR RVINRNNRLK RLQELNAPDI
IIRNEKRMLQ EAVDALFDNG RRGKTITGPN KRPLKSLSDM LKGKQGRFRQ NLLGKRVDYS
GRSVIVVGPE LKLHQCGLPK IMALELFKPF IYNKLEEKGY VTTIKSAKKM VEKERPEVWD
ILDEVIREHP VLLNRAPTLH RLGIQAFEPV LIEGKAIQLH PLVCTAFNAD FDGDQMAVHV
PLSIEAQMEA RVLMMSTNNI LSPAHGKPII VPSQDIVLGI YYMTRERAFA RGEGKVFASE
EEVRAAYDQG EVDLQAKIWV RLDGKRVETT VGRVLLYDIV PKRLPFESIN KVMDKKQLQN
LIDLTYRLCG EKETVLLADR VRSMGYGNAT RAGISIALEN MIIPRKKQEL LERAMGEVDD
IQTQYTEGLI TIGERYNKVI DIWAQVTEEV AQEMMSQIGQ ETAIGTGKDG KREERKQPSF
NPIYIMADSG ARGSAQQIRQ LAGMRGLMAK PSGEIIETPI TANFREGLNV LQYFISTHGA
RKGLADTALK TANSGYLTRR LVDVAQDAII TEYDCGAMDG ITLGALVEGG EIIEPMGERI
LGRVALDDIH DPFASSVLVK ANEEIDESKV KLIENAGIDK VKIRSVLTCQ ARRGICVECY
GRDLARGRKV NIGEAVGVIA AQSIGEPGTQ LTMRTFHIGG AASRRAEQST IENRNPGLVK
FHNVAVAKKK DGTLIVMNRN GEIIVTDDQG RERERYGVVY GAKLLVRDGQ KIETSTLLAE
WDPYSMPIIT EVAGHVKYGD LVDGVTISEQ VDEITGLARK AVIASKDPDA RPRISIKDDQ
GKTRKLANSE ADARYMLPEG ANLVVNDGDE VDAGDVIAKM PRETTKTKDI TGGLPRVAEL
FEARKPKEHA VISEIDGVVA FGKDTKGKRK VVITPEVDGK LRPDLAKEYL IGKGKHISVH
TGDRVRAGEA LMDGAANPHD ILRVLGEKEL ARWLVDEVQE VYRLQGVKIN DKHIETIVRQ
MLRRVRIVDV GDTNFLADEQ VEKFVFEEEN DKVITAGGRP AQGEPLLLGI TKASLSTESF
ISASSFQETT KVLTEAAISG KVDHLRGLKE NVIMGRLIPA GTGLPHYKHL DIEVETPVDA
VEEAEEALAV ASGEE
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