Gene Anae109_2211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2211 
Symbol 
ID5376412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2509081 
End bp2509971 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content75% 
IMG OID640843723 
Product3'-5' exonuclease 
Protein accessionYP_001379397 
Protein GI153005072 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0349] Ribonuclease D 
TIGRFAM ID[TIGR01388] ribonuclease D 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.493178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.0213505 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTC CTCGACAAGG CGCCACCCCG CTCCTCGTCG CCGACTCCTC GTCGCTCTCG 
CGGCTGGTGG AGGAGGTCCG CGCGGAGCCG GTGGTGGCGC TCGACACGGA ATCGAACAGC
TTCCACGTCT ACCGCGAGCG GATCTGCCTG CTGCAGGTGT CGACCCGCGC GGCCGACTAC
ATCGTCGATC CGCTCGCGGT GGATCCCTCG CCGCTCGGCG AGGTGCTCTG CGACGGGCGG
GAGACGGTGC TCCACGGCGC CGACTACGAC GTGCGCTGCC TCAGGCGCGA GTACGGGTGG
CACCTCCCGC GCCTGTTCGA CACCATGGCG GCGGCCCGCC GGCTGGGGCG GCAGGGGCTC
GGGCTCTCGG CGCTCGTCGA GGCCCACTTC GGCGTGCGCC TCTCGAAGAC GTTCCAGCGC
TCGGACTGGG GCCAGCGGCC GCTGACCGCC GCGCAGCTCG CCTACGCGGC GCTCGACACG
CACTACCTCC TCGCGCTGCG CGACATGCTC GCGGGCGAGC TCGACACGCT CGGCGCCAGC
GAGCAGGCGC GCCGCGAGTT CGAGCGGATC GCGGCGGTCG TCGCCCGCGA GCGGGTGTTC
GACCCCGAGG GCTTCCGGCG GCTGCGCGGC GCCCGCGAGC TCGACCCGGC CGGCCTGGCC
GTCCTGCGCG CGATCTACGT CGCGCGCGAG GAGCGGGCGA GCGGCCTGGA TCGTCCGCCG
TTCAAGGTCC TCGGCGAGGA CGCGATGATC GCCATCGCCC GCCGGCTCCC GCGCGACGCG
GACGAGCTCG GACGCATCCC GGGCGTCACC CCCTCGGTGA TGCGGCGGCT CGGTGACGAG
ATCCTCGCCG CGGTGCGTGC GGCGGCGCCG CCGGTCTCCG AGGGCACCTG A
 
Protein sequence
MTPPRQGATP LLVADSSSLS RLVEEVRAEP VVALDTESNS FHVYRERICL LQVSTRAADY 
IVDPLAVDPS PLGEVLCDGR ETVLHGADYD VRCLRREYGW HLPRLFDTMA AARRLGRQGL
GLSALVEAHF GVRLSKTFQR SDWGQRPLTA AQLAYAALDT HYLLALRDML AGELDTLGAS
EQARREFERI AAVVARERVF DPEGFRRLRG ARELDPAGLA VLRAIYVARE ERASGLDRPP
FKVLGEDAMI AIARRLPRDA DELGRIPGVT PSVMRRLGDE ILAAVRAAAP PVSEGT