Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Anae109_2126 |
Symbol | |
ID | 5375639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter sp. Fw109-5 |
Kingdom | Bacteria |
Replicon accession | NC_009675 |
Strand | - |
Start bp | 2411528 |
End bp | 2412106 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640843639 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001379313 |
Protein GI | 153004988 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.483975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.031897 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGGCG AGGCCGCCCT TGCGCGGTCT GCCGCGAAGG GCGACCGCAA GGCGTTCGGC CAGCTCGTCG ACGTGCACAA GCGCGCCGTG TTCGGGCTCT GCTTCCGTCT GCTGCGCCAC CCGGAGGAGG CGCGCGACGC CGCCCAGGAG ACGTTCGCGC GCGCCTTCGC GGCGCTCTCG ACGTACGATC CCGGCCAGCC GTTCGCGCCC TGGGTGCTCC GCATCGCACG CAACCACTGC CTCGACGTCC TGCGCCGGCG CCTCCCCGAG GCGCAGCAGT TCGAGCTCGA CGCCGAGCCG GAGGACGGCG CGCCGCGCGA GCTCGCGGAT CCCGCAGCGG AGCGCGGCGA CGAGGCGCTG GAGCGCCGCC AGCTCGCGGG CGCGCTCGAG GCCGCGGTGG CGGCGCTGCC CCAGAACTAT CGCGAGGTCG TGCACCTCTT CCACGTCGAG CACCTCTCCT ACAAGGAGAT CGCCGCGACG CTGGACGTCC CCATCGGCAC CGTAATGACC TGGCTCCACC GCGCGCGCGC CCGGCTCAAG ACGGCGCTCG CCGAGCCCGG CGCGGAGGTC ACGCGATGA
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Protein sequence | MTGEAALARS AAKGDRKAFG QLVDVHKRAV FGLCFRLLRH PEEARDAAQE TFARAFAALS TYDPGQPFAP WVLRIARNHC LDVLRRRLPE AQQFELDAEP EDGAPRELAD PAAERGDEAL ERRQLAGALE AAVAALPQNY REVVHLFHVE HLSYKEIAAT LDVPIGTVMT WLHRARARLK TALAEPGAEV TR
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