Gene Anae109_2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2126 
Symbol 
ID5375639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2411528 
End bp2412106 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content74% 
IMG OID640843639 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001379313 
Protein GI153004988 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.483975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.031897 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCG AGGCCGCCCT TGCGCGGTCT GCCGCGAAGG GCGACCGCAA GGCGTTCGGC 
CAGCTCGTCG ACGTGCACAA GCGCGCCGTG TTCGGGCTCT GCTTCCGTCT GCTGCGCCAC
CCGGAGGAGG CGCGCGACGC CGCCCAGGAG ACGTTCGCGC GCGCCTTCGC GGCGCTCTCG
ACGTACGATC CCGGCCAGCC GTTCGCGCCC TGGGTGCTCC GCATCGCACG CAACCACTGC
CTCGACGTCC TGCGCCGGCG CCTCCCCGAG GCGCAGCAGT TCGAGCTCGA CGCCGAGCCG
GAGGACGGCG CGCCGCGCGA GCTCGCGGAT CCCGCAGCGG AGCGCGGCGA CGAGGCGCTG
GAGCGCCGCC AGCTCGCGGG CGCGCTCGAG GCCGCGGTGG CGGCGCTGCC CCAGAACTAT
CGCGAGGTCG TGCACCTCTT CCACGTCGAG CACCTCTCCT ACAAGGAGAT CGCCGCGACG
CTGGACGTCC CCATCGGCAC CGTAATGACC TGGCTCCACC GCGCGCGCGC CCGGCTCAAG
ACGGCGCTCG CCGAGCCCGG CGCGGAGGTC ACGCGATGA
 
Protein sequence
MTGEAALARS AAKGDRKAFG QLVDVHKRAV FGLCFRLLRH PEEARDAAQE TFARAFAALS 
TYDPGQPFAP WVLRIARNHC LDVLRRRLPE AQQFELDAEP EDGAPRELAD PAAERGDEAL
ERRQLAGALE AAVAALPQNY REVVHLFHVE HLSYKEIAAT LDVPIGTVMT WLHRARARLK
TALAEPGAEV TR