| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_2124 |
|---|
| Symbol | |
|---|
| ID | 5375637 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | - |
|---|
| Start bp | 2409266 |
|---|
| End bp | 2410993 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 640843637 |
|---|
| Product | secretin/TonB short domain |
|---|
| Protein accession | YP_001379311 |
|---|
| Protein GI | 153004986 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0909641 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.0183027 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCGC TCCTCCTCGC CGCCCTCGTG TTCCAGCCCT CGCTCGAGGC GCCGCCCCGT
CAGCTCGCGC AGGCGACCCG CCCCGGCGCG GAGTCGCCGC CGCCGCCGCC GCGGCCCTCC
CCGCCTGCGC CCGGCCCTCG CGCGGCGGGG AGCCCCGTGC CCACGCCGCT CCCCCCGCCG
CCGCCGCCCC CGGGCGAGCT CGATCCGCTC GTCGGCGACT GGCCGGCGGA GCCCTCCGGC
AAGCGGGTCA CGCTCGCGGA CACCGTCTCG CTCGACGACG CCCTCGAGCA GATCGCCGAC
GCCGCAGGAT GGAACCTCGT CCTCAACACC GGCAGGACCG GGAACATCCA GCTCGTCCTG
AAGCTCCGCG ACGTGCCGGT CGAGGAGGCG ATGCGCGCCG CCCTGAGGGG CACCCGCCTC
GAGGCGTCGC GCCGCCGCGA CACGGTGGTC GTCTCCCCCT CGACCCTCCC CGTCGAGCGG
CGGCCCACCC TCGCCGGCTT CGGGAAGCCG AGCGGCAAGC GGTTCACCGG CGAGTTCGAG
GGCACGGACG TCGACGACGC GCTCCGACAG ATCGCGGCCG CGGGGGGCCT CTCCATCGTC
ATCCCGCCCG GCGTGCGCGG CCAGGTGTCC GGGGTGTTCA ACGCGATCGC CGTCGAGGAC
GCGCTGCGCG CGGTGCTCGA TCAGGCCGGC CTCACCGCGG AGCTCCAGGG CGGCGTGGTG
ACCGTGCGCC AGTCGCCGTT CGACGGGTTC GCAGGCGTCG GCGAGGAGGC ACGCCGGCAC
GCGCAGCGCG CCCTGCGCGA CGCCGAGCGC GCGATGCGGG ACGCCGAGGA GTGGCGCGAC
GGCCCCGAGA CGGGCTCCGA CTCGCGCGAC CGGGTCGTCA ACGGCGACGT GACGATCCGC
TCGGGCGAGG TGGCTCGCGA CGTGGTGGCC CTCCGCGGCA ACGTGCGGCT CGAGCCGGGC
GCGGTCGCGC GGGACGTCGT GGCGGTGCTC GGCAGCGTCA AGCTGGAGGG CGGCGCCAGC
GCGCGCGAGG TGACCGCCGT GATGGGGAGC GTGGAGGTGG GGCCGGGCGC CGTGATCGAG
CAGAACGCCA CCGCCGTGGG CGGGAGCGTG AAGCCCGATC CGCACGCCGC CATCGGCGGC
GAGCAGACCA GCGTCGGGGT CCCGGGGCTC GGCGGCCTCG CCGGCCTGTT CGGCTCGAGC
CTGCTCTTCG GAGGGGGCGA CTCGGCCCTC TGGGCCATCG GGCAGGCGCT CGCGAAGTTC
GCGCTGTTCT TCGCGCTCGG CCTCCTCGTC GTCGCGCTCT TCCCCCGGCG GGTGGACTCG
GTCGCGGGGG CGATGATCGC GAGTCCGTGG AGGTCGATCT TCACGGGCCT GCTCGGCATC
GTCGTGACCC CGCTGCTCGT GCTCCTCCTC GTCGTGACGG TCATCGGCAT CCCGCTCGTC
GCGGTCGTCG CCCTGCTCGT GCTGGCCGCC GGGGTGCTCG GGTTCACCGC CCTCGCCTTC
CACGTGGGGC GATCGCTGCC GCTGCGCGTC CAGCGGGGCG CGTGGGTCGT GCAGCTCGCC
GTCGGCACCG CGATCGTCGT GCTCGTGACC GAGATCCCGC TGCTCGGCGC GCTCGCCTGG
GTGGCCGGGG CGCTCATCAC GTTCGGCGCC GCGCTCCGCT CGCGCTTCGG GCAGCAGGTG
ACCGTGCTGC CGACGACGAT GGCCCCTCCG CCGGCGCCGG CGCCCTAG
|
|---|
| Protein sequence | MLALLLAALV FQPSLEAPPR QLAQATRPGA ESPPPPPRPS PPAPGPRAAG SPVPTPLPPP
PPPPGELDPL VGDWPAEPSG KRVTLADTVS LDDALEQIAD AAGWNLVLNT GRTGNIQLVL
KLRDVPVEEA MRAALRGTRL EASRRRDTVV VSPSTLPVER RPTLAGFGKP SGKRFTGEFE
GTDVDDALRQ IAAAGGLSIV IPPGVRGQVS GVFNAIAVED ALRAVLDQAG LTAELQGGVV
TVRQSPFDGF AGVGEEARRH AQRALRDAER AMRDAEEWRD GPETGSDSRD RVVNGDVTIR
SGEVARDVVA LRGNVRLEPG AVARDVVAVL GSVKLEGGAS AREVTAVMGS VEVGPGAVIE
QNATAVGGSV KPDPHAAIGG EQTSVGVPGL GGLAGLFGSS LLFGGGDSAL WAIGQALAKF
ALFFALGLLV VALFPRRVDS VAGAMIASPW RSIFTGLLGI VVTPLLVLLL VVTVIGIPLV
AVVALLVLAA GVLGFTALAF HVGRSLPLRV QRGAWVVQLA VGTAIVVLVT EIPLLGALAW
VAGALITFGA ALRSRFGQQV TVLPTTMAPP PAPAP
|
|---|
| |