Gene Anae109_2122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2122 
Symbol 
ID5374735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2406234 
End bp2407298 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content78% 
IMG OID640843635 
Productpseudouridine synthase 
Protein accessionYP_001379309 
Protein GI153004984 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases 
TIGRFAM ID[TIGR00093] pseudouridine synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.327075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.0800596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGGGCG ACGAGAAGGG TGGGCCGGAC GGCGTCCGCC TGCAGAAGTA CCTGGCGGAG 
GCCGGCGTCG CCTCGCGCCG CAAGGCGGAG GAGCTCATCC TCGCCGGGCG GGTGAAGGTG
AACGCGCGCG CGGTCACGGT GCTCGGCTCG AAGGTCGACC CGGCGCGCGA CCTCGTCACG
GTGGACGGGC GCCTCGTCTC GCGCAGCGAG ACGCGGAGCT ATTACCTGCT GTACAAGCCG
CCGGGGTGCG TCACGACCGC GTCCGACCCC GAGGGCCGCC CCACCGCGCT CGAGTACCTG
CGCGGCGTGA AGGAGCGGGT CTTCTCCGTC GGCCGGCTCG ACTTCGACGC CGAGGGCGCG
GTGCTGTTCA CCGACGACGG CGAGCTCGCG AACCGGCTCG CCCACCCTCG CTACGGTCAC
CGTCGCACCT ACCTCGTGAA GGTGCGAGGC GAGCCGCCGC CGGCCGCCCT CGAGCGGCTG
GTCGCGGGGG TGCGGCTCGA GGACGGCCCC GCGCGCGCGC TCGAGGCGGT GCCGCACGAG
CGCGCCGAGC GGAACGTCTG GATCCGGGTG GTCGTCGGGG AGGGGCGCTT CCACCTCGTG
AAGCGGCTCT GCGAGGCGGT CGGGCTCCAG GTCCAGCGGC TCTACCGGCC CGAGTTCGGC
GGCATCACGG TGGAGGGGCT GCGGCCCGGG CAGTTCCGCC CCCTCGCCCC GGTGGAGGTG
CGGGCCCTCA AGACCGCCGT GGGGCTGGCC GGCGGTGCGC CCGCGGTCGC GCCGCGGGAG
CTCCCGCGCG CCGCGCGGCG GCACGGCCAC GGCCCGCCCG CGCCGCCGGA GCTCGCGCCG
GCGCGTCGCG AGGGCGAGCG CGGCGAGCCT GGGCGCCGGG AAGGCAAGGA GCTCCCACCG
CGCGGAGAAC CGCGCGTGCG CGGGCGCGGC GAGGACGCCG GGAGAGGGCC GCGCGGAGAG
CAGCGGCAGC GCGGGCGCGG CGAGGACGCC GGGAGAGGGC CGCGCGGAGG TGCCGGCGGT
GCTCGGCGCC CGCCGCGGGG CGGTGGCGAC CGGCGCGGTC GCTGA
 
Protein sequence
MAGDEKGGPD GVRLQKYLAE AGVASRRKAE ELILAGRVKV NARAVTVLGS KVDPARDLVT 
VDGRLVSRSE TRSYYLLYKP PGCVTTASDP EGRPTALEYL RGVKERVFSV GRLDFDAEGA
VLFTDDGELA NRLAHPRYGH RRTYLVKVRG EPPPAALERL VAGVRLEDGP ARALEAVPHE
RAERNVWIRV VVGEGRFHLV KRLCEAVGLQ VQRLYRPEFG GITVEGLRPG QFRPLAPVEV
RALKTAVGLA GGAPAVAPRE LPRAARRHGH GPPAPPELAP ARREGERGEP GRREGKELPP
RGEPRVRGRG EDAGRGPRGE QRQRGRGEDA GRGPRGGAGG ARRPPRGGGD RRGR