Gene Anae109_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_2117 
Symbol 
ID5376365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2401520 
End bp2402416 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content74% 
IMG OID640843630 
Producttyrosine recombinase XerD 
Protein accessionYP_001379304 
Protein GI153004979 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02225] tyrosine recombinase XerD 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.815623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.0464222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCCGC TCGAGCCCGC GCTCGATCTG TTCGTCGCCC ACGTCCGCGT GGAGAAGGGG 
CTCGCCGAGA ACAGCGTGGA GGGCTACCTC CGCGACCTGC GCCGCTACGT CGAGCACCTC
GACGCGCTGG GGATCGGCGC CTGGGAGCGG GTGGGCCGCA TCGAGATCCA GGCGCACCTG
GGCGAGCTGG TCCGCAGGGG GCTCTCGCCC CGGTCCCAGG CGCGGGCGCT CTCCGCCATC
CGCTCCCTGC ACCGGCTGCT GTTCGCCGAG AAGCTCACTC CGGTCGACGC CGGCGACGAG
CTCGACGCTC CCAGGCCGGG CCGGAAGCTG CCGGAGCTGC TCTCGCACGA CGAGATCGCG
CGGCTGCTCG CCAGCCCCGA CCCGCGCAGC GCCGCCGGCC TGCGGGACCG GGCGATGCTC
GAGCTGCTGT ACGCCACCGG GCTGCGCGTC TCCGAGCTCG TCTCGCTCGG CCTCAACGAC
GTGAACCTCG AGACGCGGGT GCTCGTCGCG CGCGGGAAGG GGAACAAGGA GCGGATCGTG
CCGGTGGGCG CGCCCGCGGC GGAGGCGGTG AAGGCCTACC TCGCGGTCGG GCGCGAGCGG
CTCCTGCGCG GGCGGCGCTC GAAGGACCTG TTCGTCTCGC CGCGCGGTGG CCGCCTGACG
CGGCAGGGCT TCGCGAAGCT GCTCGGGCGG CACGCGCGCG CGGCCGGCAT CCGGCGACGG
ATCTCGCCGC ACAAGCTCCG GCACTCGTTC GCGACCCACC TCCTCGAGGG CGGGGCGGAT
CTGCGCGCCG TGCAGGCGAT GCTGGGCCAC GCCGACGTGT CCACGACGCA GATCTACACG
CACGTGGATC GCAGCCACGT GCGGCGGCTG TACGACCGGT TCCATCCCCG CGCGTGA
 
Protein sequence
MSPLEPALDL FVAHVRVEKG LAENSVEGYL RDLRRYVEHL DALGIGAWER VGRIEIQAHL 
GELVRRGLSP RSQARALSAI RSLHRLLFAE KLTPVDAGDE LDAPRPGRKL PELLSHDEIA
RLLASPDPRS AAGLRDRAML ELLYATGLRV SELVSLGLND VNLETRVLVA RGKGNKERIV
PVGAPAAEAV KAYLAVGRER LLRGRRSKDL FVSPRGGRLT RQGFAKLLGR HARAAGIRRR
ISPHKLRHSF ATHLLEGGAD LRAVQAMLGH ADVSTTQIYT HVDRSHVRRL YDRFHPRA