| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Anae109_1953 |
|---|
| Symbol | |
|---|
| ID | 5376934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter sp. Fw109-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009675 |
|---|
| Strand | + |
|---|
| Start bp | 2213203 |
|---|
| End bp | 2215473 |
|---|
| Gene Length | 2271 bp |
|---|
| Protein Length | 756 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 640843462 |
|---|
| Product | lytic transglycosylase catalytic |
|---|
| Protein accession | YP_001379140 |
|---|
| Protein GI | 153004815 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.314899 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCCG CAGCGCTCGC CGCCGTCCTC GCCGCATCGG TCAGCCCGTC CGACGCCGCC
CTCGATCTCA CCCCCTACTT CCGGAGCGGC CCGGCCGCCC AGGCGAAGAC CGCGTTCGAC
GCCGGACGGT ACGCCGAGGC CGCGGCGAAG CTCGCGCGCG AGGGGACGCC CGAGGCGCGG
CTCCTCCGCG CGATGGCGCT CGTCGAGGCG GGCAGGGCGG CCGAGGCGGT CGAGCCGCTC
GCGGCGCTGG AGGCGCGCCT CCCCGACGCC GCGGACCGGA TCGCGCTGCT GCGCGGCCGC
GCGCTCGAGG CGGCGGGAGC GGCGCGCGAG GCCCTGGCGT CGTTCGCGGC GGTGCCGGAC
GGCTCGCTCG TGTCCGGCGA GGCGAGGCTC GCGCGGGCAC GGCTCGCGCG GCGGCTCGGG
GAGCGCGCCC TCGCGCTCGA CGCCCTCGCG CCGCTCGTCT CCTCCCCGCC GCCGGAGGCG
GGCGCGGCCG ACCTGGGCGC GGCGGCCCTG CTGCTCGCGG GACGGATCGC CGGCGAGGGC
GAGCGCCCCG ATCCCGCCGC GGCGCGGCGC GCCTTCTCGT CCTGCTGGGC GGACCACCCG
CTGGCGCGCG AGGCCGGAGA GTGCCTCGCG GCGCTGCGAG GCCTGCCCGC GCCTCACGGC
GGCGAGCCGG GCGTGGCCGA GCAGGTTCGG CGCGCCGAGG CGCTCCTCGA GGCGAACCTC
AACGAGGCGG CGGCGGAGCT CCTCCGCCGG GCGGTGCCGG AGCTCGCCGC GGCCGCGCCA
GGAGAGGACC TCGCGTGCCG TGCCCGCGCC GCCCTCGGCC GCGCGCACCG CAAGACGCGC
AGCTACGCGG ACGCGGTGGA GGCCCTCCGG CCGGTCGTCG AGAGCTGCGA CGATCCCTCC
GTGCGCGTGC GCGCGCTGTA TCTCGTGGCC GGGGCGACCG CGAACACGGG GGACAAGGAG
GGGGCGGTCG CCCTCTACCG GCGCCTCGCC CGCGACTACC CGCGCCACAC CCTCGCGGAC
GACGCGCTCT TCTTCGCCGC CGACCTCCTC CTGCGCGCGG AGCGCGAGGG GGAGGCGCGC
GAGGCGCTCG CCGCGATCGT CCGCGACCAC CGGGGCGGCG ACCACTGGGA CGAGGCGCGG
TTCCGGCTCG CGTGGCTCGC GCGCCGCGCG GGCGATCACG ACGGCGCCGT CGCGCAGCTC
CTCGCCATCG AGGAGAGCGA GCGCGAGCTC GATCCGTACG AGCACGCGCG CGCGGCGTAC
TGGCGGGCGC GGATCCTCTC CGCGCGCGGC GAGGCGGGCG CCCGTGCCGC GCAGGCGATC
TGGGCGGACC TCTCCGCGCG CTACCCGGGC GACTACTACG GGCTGCTCGC CCGCGCGCGC
CTCGCCGGCG GCGCGGACGG CGCCGACGTC GGCGCCCGCG CCGTGCCCGC GAGCGCGCAG
CCGCGCGCCG GCGCGCCCTC GATCGTCCCG GCGGTGATCG GTCCCCAGCC GGCGTGGCGC
GCCGGCCCGC TGGCGGCGGA CGCGCACTTC CGCGCCGGCG TCCTGCTGCT GCGCATGGGC
TTCCCGCGCG AGGCGAGCGC GGAGCTCGCG GCCGTCGAGC CGCTCCGCCT CGCCGATCCC
GACGCGCCCG ACGCCGCGCT CGTGGTCGCG GATCTGCTCG ACCGCGCCGG CGACCACCGC
AACGCGCACC AGCTCCTCCG CACGCGGGCC CGCGTCGCGC TCCGCCAGGT GCCCTCGTCC
GAGAACCTCC GCGCCTGGCG CATCGCCTAC CCGCCGGCGT TCCGGGACCA CGTGCAGCGC
TGGGCGCCCC CGGCGGGGGT CCCGGTGGAG CTGCTTCAGG CGCTGATGCG CGAGGAGAGT
GCGCTCGATC CGCGCGCGGT CTCCCCGGTG GGCGCGGTCG GCCTCACGCA GCTCATGCTG
CCGACCGCGC GAGAGGTCGC CCGGCAGCTG AAGCTCCGGC GCCCCTCGCG CGCCGACCTG
ATGGACGGCG CGCTCAACAT CCGCATCGGC GCGCGCTACC TCGGCCAGCT GCTCCGCCGC
TTCGACGGGC GCGTGGCGCT GGCGCTCGCA GCCTACAACG CCGGGGGCGG CGCGGTGTCG
CGCTGGCTCG AGGCCCGGGG CGACCTCGAG CTCGACGAGT TCGTCGAGGA GATCCCCTAC
GAGGAGACCC GGGGCTACGT GAAGCGCGTG CTGCGCTCCT ATGCGGCGTA CCGGCTCCTC
TACGGCGATG GAGCGCCCGC CGAGGGGTTG TTCCGCGTGG CCGGCCGCTA G
|
|---|
| Protein sequence | MIAAALAAVL AASVSPSDAA LDLTPYFRSG PAAQAKTAFD AGRYAEAAAK LAREGTPEAR
LLRAMALVEA GRAAEAVEPL AALEARLPDA ADRIALLRGR ALEAAGAARE ALASFAAVPD
GSLVSGEARL ARARLARRLG ERALALDALA PLVSSPPPEA GAADLGAAAL LLAGRIAGEG
ERPDPAAARR AFSSCWADHP LAREAGECLA ALRGLPAPHG GEPGVAEQVR RAEALLEANL
NEAAAELLRR AVPELAAAAP GEDLACRARA ALGRAHRKTR SYADAVEALR PVVESCDDPS
VRVRALYLVA GATANTGDKE GAVALYRRLA RDYPRHTLAD DALFFAADLL LRAEREGEAR
EALAAIVRDH RGGDHWDEAR FRLAWLARRA GDHDGAVAQL LAIEESEREL DPYEHARAAY
WRARILSARG EAGARAAQAI WADLSARYPG DYYGLLARAR LAGGADGADV GARAVPASAQ
PRAGAPSIVP AVIGPQPAWR AGPLAADAHF RAGVLLLRMG FPREASAELA AVEPLRLADP
DAPDAALVVA DLLDRAGDHR NAHQLLRTRA RVALRQVPSS ENLRAWRIAY PPAFRDHVQR
WAPPAGVPVE LLQALMREES ALDPRAVSPV GAVGLTQLML PTAREVARQL KLRRPSRADL
MDGALNIRIG ARYLGQLLRR FDGRVALALA AYNAGGGAVS RWLEARGDLE LDEFVEEIPY
EETRGYVKRV LRSYAAYRLL YGDGAPAEGL FRVAGR
|
|---|
| |