Gene Anae109_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAnae109_1943 
Symbol 
ID5377424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter sp. Fw109-5 
KingdomBacteria 
Replicon accessionNC_009675 
Strand
Start bp2201278 
End bp2201775 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content75% 
IMG OID640843452 
Product16S rRNA processing protein RimM 
Protein accessionYP_001379130 
Protein GI153004805 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0806] RimM protein, required for 16S rRNA processing 
TIGRFAM ID[TIGR02273] 16S rRNA processing protein RimM 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCGCA TCCGGCTCGG CAAGGTCGTC CGGGCCGTCG GCCTGAAGGG CCACCTCGGG 
GTGGCCGGGA GCGAGGGCGC GCTCGCGACG GTGCGCAGGA TCGCGCTGAG GCGCGAGGGC
GAGCCGGAGC CGCCGCTGCA GGAGGTGCTC GAGGCGCGCC CGCAGGGACG CCTCTGGGCG
GTGAGGATCG AGGGGGTCTC CGACCGAACG TCGGCGGAGG CGTGGGTGGG GGCGGAGGTG
CTCGCGCTTC GGGAGGATCT TCCGGAGGCG GGCGAGGCGC GGCACTACTG GGCCGACCTC
GAGGGGCTTC CGGTGGTGAC GGTCGCGGGG GCGGCGATCG GCACGGTGAC CGGGCTGTAC
GAGACGGGCG GCGTGGACGT GCTGGTGGTG ACGACGGAGG AGGGCGGAGA GAAGCTCGTG
CCGCTCGCCC CGTACGTCGA GGTGGACGTC GCGGGGCGGC GCGTGGTGGT GGATCCGCCC
GAGGGGCTTC TGGACTGA
 
Protein sequence
MARIRLGKVV RAVGLKGHLG VAGSEGALAT VRRIALRREG EPEPPLQEVL EARPQGRLWA 
VRIEGVSDRT SAEAWVGAEV LALREDLPEA GEARHYWADL EGLPVVTVAG AAIGTVTGLY
ETGGVDVLVV TTEEGGEKLV PLAPYVEVDV AGRRVVVDPP EGLLD